Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RPS4XP7-201ENST00000406274 780 ntBASIC2.37□□□□□ -2.03
ACTBP60709 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.37□□□□□ -2.03
ACTBP60709 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.37□□□□□ -2.03
ACTBP60709 Z92545.1-201ENST00000411782 234 ntBASIC2.37□□□□□ -2.03
ACTBP60709 AC007064.1-201ENST00000412238 351 ntBASIC2.37□□□□□ -2.03
ACTBP60709 MTCO1P39-201ENST00000426148 480 ntBASIC2.37□□□□□ -2.03
ACTBP60709 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.37□□□□□ -2.03
ACTBP60709 CYCSP32-201ENST00000440548 321 ntBASIC2.37□□□□□ -2.03
ACTBP60709 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.37□□□□□ -2.03
ACTBP60709 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.37□□□□□ -2.03
ACTBP60709 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.37□□□□□ -2.03
ACTBP60709 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.37□□□□□ -2.03
ACTBP60709 AP001992.1-205ENST00000462248 379 ntBASIC2.37□□□□□ -2.03
ACTBP60709 AC104108.1-201ENST00000509930 412 ntBASIC2.37□□□□□ -2.03
ACTBP60709 AC113155.1-201ENST00000511141 769 ntBASIC2.37□□□□□ -2.03
ACTBP60709 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.37□□□□□ -2.03
ACTBP60709 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.37□□□□□ -2.03
ACTBP60709 SCARNA13-201ENST00000516672 275 ntBASIC2.37□□□□□ -2.03
ACTBP60709 AC022784.5-201ENST00000522241 437 ntBASIC2.37□□□□□ -2.03
ACTBP60709 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.37□□□□□ -2.03
ACTBP60709 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.37□□□□□ -2.03
ACTBP60709 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.37□□□□□ -2.03
ACTBP60709 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.37□□□□□ -2.03
ACTBP60709 AC008277.2-201ENST00000605196 797 ntBASIC2.37□□□□□ -2.03
ACTBP60709 AL162274.2-201ENST00000614406 332 ntBASIC2.37□□□□□ -2.03
ACTBP60709 AC027309.3-201ENST00000623419 351 ntBASIC2.37□□□□□ -2.03
ACTBP60709 AL590396.2-201ENST00000636511 1041 ntBASIC2.37□□□□□ -2.03
ACTBP60709 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.37□□□□□ -2.03
ACTBP60709 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.37□□□□□ -2.03
ACTBP60709 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
ACTBP60709 AL365361.1-201ENST00000566942 3481 ntBASIC2.36□□□□□ -2.03
ACTBP60709 GNG5P1-201ENST00000255500 204 ntBASIC2.36□□□□□ -2.03
ACTBP60709 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ACTBP60709 MIR649-201ENST00000384843 97 ntBASIC2.36□□□□□ -2.03
ACTBP60709 AL136372.1-201ENST00000403060 228 ntBASIC2.36□□□□□ -2.03
ACTBP60709 RNU6-77P-201ENST00000410554 91 ntBASIC2.36□□□□□ -2.03
ACTBP60709 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.36□□□□□ -2.03
ACTBP60709 CR848007.2-201ENST00000424918 787 ntBASIC2.36□□□□□ -2.03
ACTBP60709 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.36□□□□□ -2.03
ACTBP60709 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.36□□□□□ -2.03
ACTBP60709 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.36□□□□□ -2.03
ACTBP60709 AL589880.1-201ENST00000448271 287 ntBASIC2.36□□□□□ -2.03
ACTBP60709 AC112492.1-201ENST00000449607 712 ntBASIC2.36□□□□□ -2.03
ACTBP60709 AC011753.1-201ENST00000451001 220 ntBASIC2.36□□□□□ -2.03
ACTBP60709 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.36□□□□□ -2.03
ACTBP60709 NIPA2P5-201ENST00000452282 464 ntBASIC2.36□□□□□ -2.03
ACTBP60709 AC073901.1-201ENST00000462471 408 ntBASIC2.36□□□□□ -2.03
ACTBP60709 VPS26AP1-201ENST00000483197 979 ntBASIC2.36□□□□□ -2.03
ACTBP60709 RNA5SP341-201ENST00000516261 117 ntBASIC2.36□□□□□ -2.03
ACTBP60709 RNA5SP82-201ENST00000516707 92 ntBASIC2.36□□□□□ -2.03
ACTBP60709 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.36□□□□□ -2.03
ACTBP60709 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.36□□□□□ -2.03
ACTBP60709 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
ACTBP60709 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.36□□□□□ -2.03
ACTBP60709 AC074051.3-201ENST00000570238 358 ntBASIC2.36□□□□□ -2.03
ACTBP60709 MIR3200-201ENST00000580767 85 ntBASIC2.36□□□□□ -2.03
ACTBP60709 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
ACTBP60709 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.36□□□□□ -2.03
ACTBP60709 AC096586.1-201ENST00000610267 561 ntBASIC2.36□□□□□ -2.03
ACTBP60709 AL163051.2-201ENST00000618976 735 ntBASIC2.36□□□□□ -2.03
ACTBP60709 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.36□□□□□ -2.03
ACTBP60709 CRYM-AS1-204ENST00000637983 556 ntBASIC2.36□□□□□ -2.03
ACTBP60709 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ACTBP60709 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.36□□□□□ -2.03
ACTBP60709 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
ACTBP60709 AL355596.1-201ENST00000565399 3996 ntBASIC2.35□□□□□ -2.03
ACTBP60709 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.35□□□□□ -2.03
ACTBP60709 AC131280.1-202ENST00000624067 4211 ntBASIC2.35□□□□□ -2.03
ACTBP60709 AC130650.2-201ENST00000618736 2403 ntBASIC2.35□□□□□ -2.03
ACTBP60709 MIR6073-201ENST00000352083 89 ntBASIC2.35□□□□□ -2.03
ACTBP60709 RNU6-198P-201ENST00000384258 104 ntBASIC2.35□□□□□ -2.03
ACTBP60709 MIR524-201ENST00000385242 87 ntBASIC2.35□□□□□ -2.03
ACTBP60709 RPL17P50-201ENST00000396131 546 ntBASIC2.35□□□□□ -2.03
ACTBP60709 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.35□□□□□ -2.03
ACTBP60709 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.35□□□□□ -2.03
ACTBP60709 AC233981.1-201ENST00000423224 461 ntBASIC2.35□□□□□ -2.03
ACTBP60709 AL009174.1-201ENST00000426577 416 ntBASIC2.35□□□□□ -2.03
ACTBP60709 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.35□□□□□ -2.03
ACTBP60709 ARPC3P1-201ENST00000437218 533 ntBASIC2.35□□□□□ -2.03
ACTBP60709 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.35□□□□□ -2.03
ACTBP60709 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.35□□□□□ -2.03
ACTBP60709 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.35□□□□□ -2.03
ACTBP60709 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.35□□□□□ -2.03
ACTBP60709 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.35□□□□□ -2.03
ACTBP60709 SETP6-201ENST00000479329 568 ntBASIC2.35□□□□□ -2.03
ACTBP60709 MRPL42P6-201ENST00000486397 371 ntBASIC2.35□□□□□ -2.03
ACTBP60709 SRIP1-201ENST00000489235 288 ntBASIC2.35□□□□□ -2.03
ACTBP60709 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.35□□□□□ -2.03
ACTBP60709 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.35□□□□□ -2.03
ACTBP60709 SNORA31.18-201ENST00000517043 134 ntBASIC2.35□□□□□ -2.03
ACTBP60709 AC090136.1-201ENST00000520009 240 ntBASIC2.35□□□□□ -2.03
ACTBP60709 IGJP1-201ENST00000522682 475 ntBASIC2.35□□□□□ -2.03
ACTBP60709 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.35□□□□□ -2.03
ACTBP60709 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.35□□□□□ -2.03
ACTBP60709 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.35□□□□□ -2.03
ACTBP60709 LSM6P2-201ENST00000552208 177 ntBASIC2.35□□□□□ -2.03
ACTBP60709 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.35□□□□□ -2.03
ACTBP60709 AC106734.1-201ENST00000568646 663 ntBASIC2.35□□□□□ -2.03
ACTBP60709 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ACTBP60709 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms