Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC010460.1-201ENST00000507087 466 ntBASIC4.26□□□□□ -1.73
COPAP53621 IGKV2D-23-201ENST00000518179 286 ntBASIC4.26□□□□□ -1.73
COPAP53621 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.26□□□□□ -1.73
COPAP53621 AC006064.5-201ENST00000541782 248 ntBASIC4.26□□□□□ -1.73
COPAP53621 SETP2-201ENST00000553886 926 ntBASIC4.26□□□□□ -1.73
COPAP53621 RPL21P5-201ENST00000554662 472 ntBASIC4.26□□□□□ -1.73
COPAP53621 AL157394.1-201ENST00000562983 1224 ntBASIC4.26□□□□□ -1.73
COPAP53621 AC009101.1-201ENST00000568135 242 ntBASIC4.26□□□□□ -1.73
COPAP53621 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.26□□□□□ -1.73
COPAP53621 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.26□□□□□ -1.73
COPAP53621 MIR4644-201ENST00000579929 84 ntBASIC4.26□□□□□ -1.73
COPAP53621 AC060771.1-201ENST00000582031 164 ntBASIC4.26□□□□□ -1.73
COPAP53621 AC006130.2-201ENST00000586202 326 ntBASIC4.26□□□□□ -1.73
COPAP53621 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.26□□□□□ -1.73
COPAP53621 SNRPGP15-201ENST00000600149 222 ntBASIC4.26□□□□□ -1.73
COPAP53621 AC068790.5-201ENST00000602741 355 ntBASIC4.26□□□□□ -1.73
COPAP53621 AC011451.2-201ENST00000604303 598 ntBASIC4.26□□□□□ -1.73
COPAP53621 AL365503.1-201ENST00000605247 905 ntBASIC4.26□□□□□ -1.73
COPAP53621 AC103710.3-201ENST00000608157 948 ntBASIC4.26□□□□□ -1.73
COPAP53621 AC112200.1-201ENST00000625015 234 ntBASIC4.26□□□□□ -1.73
COPAP53621 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COPAP53621 AC010149.2-201ENST00000637608 315 ntBASIC4.26□□□□□ -1.73
COPAP53621 AC099654.12-201ENST00000639868 649 ntBASIC4.26□□□□□ -1.73
COPAP53621 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.26□□□□□ -1.73
COPAP53621 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
COPAP53621 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.26□□□□□ -1.73
COPAP53621 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
COPAP53621 AF127577.6-201ENST00000623352 2191 ntBASIC4.26□□□□□ -1.73
COPAP53621 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COPAP53621 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COPAP53621 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.25□□□□□ -1.73
COPAP53621 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
COPAP53621 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COPAP53621 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COPAP53621 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.25□□□□□ -1.73
COPAP53621 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.25□□□□□ -1.73
COPAP53621 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
COPAP53621 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
COPAP53621 Y_RNA.582-201ENST00000391023 95 ntBASIC4.25□□□□□ -1.73
COPAP53621 SNORA48.7-201ENST00000391302 135 ntBASIC4.25□□□□□ -1.73
COPAP53621 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COPAP53621 RPL7P25-201ENST00000404151 721 ntBASIC4.25□□□□□ -1.73
COPAP53621 RPL21P65-201ENST00000406094 466 ntBASIC4.25□□□□□ -1.73
COPAP53621 UBE2V1P10-201ENST00000414685 269 ntBASIC4.25□□□□□ -1.73
COPAP53621 AC108032.1-201ENST00000416706 207 ntBASIC4.25□□□□□ -1.73
COPAP53621 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.25□□□□□ -1.73
COPAP53621 BX890604.2-201ENST00000427883 474 ntBASIC4.25□□□□□ -1.73
COPAP53621 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.25□□□□□ -1.73
COPAP53621 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.25□□□□□ -1.73
COPAP53621 MTND4LP10-201ENST00000435146 291 ntBASIC4.25□□□□□ -1.73
COPAP53621 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.25□□□□□ -1.73
COPAP53621 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.25□□□□□ -1.73
COPAP53621 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.25□□□□□ -1.73
COPAP53621 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.25□□□□□ -1.73
COPAP53621 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.25□□□□□ -1.73
COPAP53621 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.25□□□□□ -1.73
COPAP53621 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.25□□□□□ -1.73
COPAP53621 SNRPGP3-201ENST00000469405 227 ntBASIC4.25□□□□□ -1.73
COPAP53621 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.25□□□□□ -1.73
COPAP53621 AC107401.1-201ENST00000503426 685 ntBASIC4.25□□□□□ -1.73
COPAP53621 AC025554.1-201ENST00000505641 188 ntBASIC4.25□□□□□ -1.73
COPAP53621 RPL37P25-201ENST00000507308 276 ntBASIC4.25□□□□□ -1.73
COPAP53621 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.25□□□□□ -1.73
COPAP53621 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.25□□□□□ -1.73
COPAP53621 AP003497.1-201ENST00000528472 562 ntBASIC4.25□□□□□ -1.73
COPAP53621 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COPAP53621 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.25□□□□□ -1.73
COPAP53621 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.25□□□□□ -1.73
COPAP53621 MIR3682-201ENST00000581338 84 ntBASIC4.25□□□□□ -1.73
COPAP53621 AL031176.1-201ENST00000604554 466 ntBASIC4.25□□□□□ -1.73
COPAP53621 AC006023.2-201ENST00000609916 167 ntBASIC4.25□□□□□ -1.73
COPAP53621 AC091834.1-201ENST00000614543 472 ntBASIC4.25□□□□□ -1.73
COPAP53621 AC008785.1-201ENST00000624475 456 ntBASIC4.25□□□□□ -1.73
COPAP53621 AC068137.3-201ENST00000639191 341 ntBASIC4.25□□□□□ -1.73
COPAP53621 AC073869.6-201ENST00000640656 341 ntBASIC4.25□□□□□ -1.73
COPAP53621 AC018555.1-201ENST00000567548 1980 ntBASIC4.25□□□□□ -1.73
COPAP53621 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COPAP53621 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COPAP53621 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COPAP53621 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
COPAP53621 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.24□□□□□ -1.73
COPAP53621 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.24□□□□□ -1.73
COPAP53621 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COPAP53621 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.24□□□□□ -1.73
COPAP53621 AC011460.1-201ENST00000636268 1834 ntBASIC4.24□□□□□ -1.73
COPAP53621 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COPAP53621 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
COPAP53621 RNU6-335P-201ENST00000364563 113 ntBASIC4.24□□□□□ -1.73
COPAP53621 Y_RNA.548-201ENST00000384656 105 ntBASIC4.24□□□□□ -1.73
COPAP53621 RNU6-114P-201ENST00000384704 105 ntBASIC4.24□□□□□ -1.73
COPAP53621 RNU11-4P-201ENST00000391149 133 ntBASIC4.24□□□□□ -1.73
COPAP53621 SNORD66.1-201ENST00000391230 76 ntBASIC4.24□□□□□ -1.73
COPAP53621 CCNG1P1-201ENST00000406783 885 ntBASIC4.24□□□□□ -1.73
COPAP53621 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.24□□□□□ -1.73
COPAP53621 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COPAP53621 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.24□□□□□ -1.73
COPAP53621 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.24□□□□□ -1.73
COPAP53621 MTND1P4-201ENST00000435196 415 ntBASIC4.24□□□□□ -1.73
COPAP53621 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COPAP53621 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms