Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RPS15AP17-201ENST00000470598 390 ntBASIC4.95□□□□□ -1.62
MRE11P49959 RBM43P1-201ENST00000476891 1081 ntBASIC4.95□□□□□ -1.62
MRE11P49959 MTND1P3-201ENST00000484956 952 ntBASIC4.95□□□□□ -1.62
MRE11P49959 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.95□□□□□ -1.62
MRE11P49959 AC010493.1-201ENST00000513479 292 ntBASIC4.95□□□□□ -1.62
MRE11P49959 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.95□□□□□ -1.62
MRE11P49959 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.95□□□□□ -1.62
MRE11P49959 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.95□□□□□ -1.62
MRE11P49959 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.95□□□□□ -1.62
MRE11P49959 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.95□□□□□ -1.62
MRE11P49959 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.95□□□□□ -1.62
MRE11P49959 AL157394.1-201ENST00000562983 1224 ntBASIC4.95□□□□□ -1.62
MRE11P49959 RN7SL652P-201ENST00000577769 300 ntBASIC4.95□□□□□ -1.62
MRE11P49959 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.95□□□□□ -1.62
MRE11P49959 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.95□□□□□ -1.62
MRE11P49959 IPO5P1-202ENST00000600039 287 ntBASIC4.95□□□□□ -1.62
MRE11P49959 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
MRE11P49959 KC877982.1-201ENST00000602313 470 ntBASIC4.95□□□□□ -1.62
MRE11P49959 AL359999.1-201ENST00000604513 294 ntBASIC4.95□□□□□ -1.62
MRE11P49959 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.95□□□□□ -1.62
MRE11P49959 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.95□□□□□ -1.62
MRE11P49959 AL450472.3-201ENST00000615578 367 ntBASIC4.95□□□□□ -1.62
MRE11P49959 AC010133.1-201ENST00000615809 842 ntBASIC4.95□□□□□ -1.62
MRE11P49959 AL359697.1-201ENST00000624879 587 ntBASIC4.95□□□□□ -1.62
MRE11P49959 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
MRE11P49959 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MRE11P49959 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.95□□□□□ -1.62
MRE11P49959 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MRE11P49959 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MRE11P49959 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
MRE11P49959 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
MRE11P49959 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.94□□□□□ -1.62
MRE11P49959 AC134882.1-201ENST00000603738 1676 ntBASIC4.94□□□□□ -1.62
MRE11P49959 SPRR2C-201ENST00000290702 219 ntBASIC4.94□□□□□ -1.62
MRE11P49959 MIR423-201ENST00000362201 94 ntBASIC4.94□□□□□ -1.62
MRE11P49959 Y_RNA.160-201ENST00000363677 92 ntBASIC4.94□□□□□ -1.62
MRE11P49959 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
MRE11P49959 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
MRE11P49959 MIR449B-201ENST00000384995 97 ntBASIC4.94□□□□□ -1.62
MRE11P49959 snosnR66.1-201ENST00000391095 99 ntBASIC4.94□□□□□ -1.62
MRE11P49959 PPIAP31-201ENST00000405422 495 ntBASIC4.94□□□□□ -1.62
MRE11P49959 RSU1P3-201ENST00000412878 835 ntBASIC4.94□□□□□ -1.62
MRE11P49959 HMGB3P20-201ENST00000417997 600 ntBASIC4.94□□□□□ -1.62
MRE11P49959 UQCRBP1-201ENST00000421129 336 ntBASIC4.94□□□□□ -1.62
MRE11P49959 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
MRE11P49959 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.94□□□□□ -1.62
MRE11P49959 MTND5P14-201ENST00000441481 1267 ntBASIC4.94□□□□□ -1.62
MRE11P49959 RPL23AP16-201ENST00000441715 421 ntBASIC4.94□□□□□ -1.62
MRE11P49959 AP000542.1-201ENST00000448473 371 ntBASIC4.94□□□□□ -1.62
MRE11P49959 AL162591.2-201ENST00000449634 317 ntBASIC4.94□□□□□ -1.62
MRE11P49959 HMGN3P1-201ENST00000453847 193 ntBASIC4.94□□□□□ -1.62
MRE11P49959 C1DP4-201ENST00000455429 424 ntBASIC4.94□□□□□ -1.62
MRE11P49959 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MRE11P49959 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.94□□□□□ -1.62
MRE11P49959 MTND3P22-201ENST00000510932 243 ntBASIC4.94□□□□□ -1.62
MRE11P49959 AC025465.4-201ENST00000513422 638 ntBASIC4.94□□□□□ -1.62
MRE11P49959 Y_RNA.693-201ENST00000516641 110 ntBASIC4.94□□□□□ -1.62
MRE11P49959 SNORA70.24-201ENST00000517233 118 ntBASIC4.94□□□□□ -1.62
MRE11P49959 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.94□□□□□ -1.62
MRE11P49959 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.94□□□□□ -1.62
MRE11P49959 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.94□□□□□ -1.62
MRE11P49959 AL512360.1-201ENST00000555346 234 ntBASIC4.94□□□□□ -1.62
MRE11P49959 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
MRE11P49959 ANP32BP3-201ENST00000559213 706 ntBASIC4.94□□□□□ -1.62
MRE11P49959 AC025678.1-201ENST00000567861 338 ntBASIC4.94□□□□□ -1.62
MRE11P49959 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.94□□□□□ -1.62
MRE11P49959 MIR5186-201ENST00000577504 120 ntBASIC4.94□□□□□ -1.62
MRE11P49959 AC069061.3-201ENST00000582254 823 ntBASIC4.94□□□□□ -1.62
MRE11P49959 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.94□□□□□ -1.62
MRE11P49959 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MRE11P49959 AC115621.1-201ENST00000604653 858 ntBASIC4.94□□□□□ -1.62
MRE11P49959 AC007179.3-201ENST00000604976 235 ntBASIC4.94□□□□□ -1.62
MRE11P49959 AC087045.1-201ENST00000605856 382 ntBASIC4.94□□□□□ -1.62
MRE11P49959 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.94□□□□□ -1.62
MRE11P49959 AC128687.2-201ENST00000609657 566 ntBASIC4.94□□□□□ -1.62
MRE11P49959 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.94□□□□□ -1.62
MRE11P49959 MIR7702-201ENST00000621931 59 ntBASIC4.94□□□□□ -1.62
MRE11P49959 HSPA8P1-201ENST00000425843 1833 ntBASIC4.94□□□□□ -1.62
MRE11P49959 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MRE11P49959 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MRE11P49959 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MRE11P49959 RPS4XP5-202ENST00000449995 1334 ntBASIC4.94□□□□□ -1.62
MRE11P49959 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MRE11P49959 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.94□□□□□ -1.62
MRE11P49959 AC138915.3-201ENST00000562908 1389 ntBASIC4.93□□□□□ -1.62
MRE11P49959 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MRE11P49959 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MRE11P49959 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MRE11P49959 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
MRE11P49959 RNU6-1085P-201ENST00000363576 107 ntBASIC4.93□□□□□ -1.62
MRE11P49959 RNU6-877P-201ENST00000383868 107 ntBASIC4.93□□□□□ -1.62
MRE11P49959 RNU6-483P-201ENST00000384088 108 ntBASIC4.93□□□□□ -1.62
MRE11P49959 MIR7-3-201ENST00000384898 110 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AL603766.1-201ENST00000407763 664 ntBASIC4.93□□□□□ -1.62
MRE11P49959 RN7SKP267-201ENST00000410381 285 ntBASIC4.93□□□□□ -1.62
MRE11P49959 RN7SKP159-201ENST00000410657 292 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.93□□□□□ -1.62
MRE11P49959 AL161631.1-201ENST00000417933 486 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AC140479.3-201ENST00000418944 1126 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms