Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.94□□□□□ -2.1
CENPFP49454 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.94□□□□□ -2.1
CENPFP49454 AC009314.1-201ENST00000603871 304 ntBASIC1.94□□□□□ -2.1
CENPFP49454 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.94□□□□□ -2.1
CENPFP49454 AC105429.2-201ENST00000610567 517 ntBASIC1.94□□□□□ -2.1
CENPFP49454 uc_338.5-201ENST00000611839 155 ntBASIC1.94□□□□□ -2.1
CENPFP49454 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.94□□□□□ -2.1
CENPFP49454 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CENPFP49454 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.94□□□□□ -2.1
CENPFP49454 Y_RNA.68-201ENST00000362881 102 ntBASIC1.93□□□□□ -2.1
CENPFP49454 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.93□□□□□ -2.1
CENPFP49454 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.93□□□□□ -2.1
CENPFP49454 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.93□□□□□ -2.1
CENPFP49454 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.93□□□□□ -2.1
CENPFP49454 AC129850.1-201ENST00000436203 508 ntBASIC1.93□□□□□ -2.1
CENPFP49454 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.93□□□□□ -2.1
CENPFP49454 CBX3P5-201ENST00000552017 521 ntBASIC1.93□□□□□ -2.1
CENPFP49454 AL133216.2-202ENST00000634512 349 ntBASIC1.93□□□□□ -2.1
CENPFP49454 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CENPFP49454 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.93□□□□□ -2.1
CENPFP49454 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.93□□□□□ -2.1
CENPFP49454 AL356575.1-201ENST00000603008 283 ntBASIC1.93□□□□□ -2.1
CENPFP49454 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.93□□□□□ -2.1
CENPFP49454 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
CENPFP49454 POLHP1-201ENST00000411806 470 ntBASIC1.93□□□□□ -2.1
CENPFP49454 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.93□□□□□ -2.1
CENPFP49454 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.93□□□□□ -2.1
CENPFP49454 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.93□□□□□ -2.1
CENPFP49454 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.92□□□□□ -2.1
CENPFP49454 RNA5SP344-201ENST00000411081 104 ntBASIC1.92□□□□□ -2.1
CENPFP49454 AC079804.2-201ENST00000490376 200 ntBASIC1.92□□□□□ -2.1
CENPFP49454 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.92□□□□□ -2.1
CENPFP49454 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.92□□□□□ -2.1
CENPFP49454 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.92□□□□□ -2.1
CENPFP49454 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.92□□□□□ -2.1
CENPFP49454 MTCO3P13-201ENST00000577757 781 ntBASIC1.92□□□□□ -2.1
CENPFP49454 MIR151B-201ENST00000584249 96 ntBASIC1.92□□□□□ -2.1
CENPFP49454 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CENPFP49454 MTCYBP31-201ENST00000438855 1122 ntBASIC1.92□□□□□ -2.1
CENPFP49454 BNIP3P2-201ENST00000441221 577 ntBASIC1.92□□□□□ -2.1
CENPFP49454 ARL4AP2-201ENST00000507378 601 ntBASIC1.92□□□□□ -2.1
CENPFP49454 RNA5SP476-201ENST00000516613 103 ntBASIC1.92□□□□□ -2.1
CENPFP49454 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.92□□□□□ -2.1
CENPFP49454 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.92□□□□□ -2.1
CENPFP49454 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
CENPFP49454 AC092447.7-201ENST00000422212 1621 ntBASIC1.92□□□□□ -2.1
CENPFP49454 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CENPFP49454 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CENPFP49454 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.91□□□□□ -2.1
CENPFP49454 AMD1P1-201ENST00000457220 922 ntBASIC1.91□□□□□ -2.1
CENPFP49454 RNU6-717P-201ENST00000459076 104 ntBASIC1.91□□□□□ -2.1
CENPFP49454 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.91□□□□□ -2.1
CENPFP49454 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.91□□□□□ -2.1
CENPFP49454 AL137847.3-201ENST00000611521 109 ntBASIC1.91□□□□□ -2.1
CENPFP49454 MTND5P12-201ENST00000502851 1449 ntBASIC1.91□□□□□ -2.1
CENPFP49454 RNY1P4-201ENST00000384595 115 ntBASIC1.91□□□□□ -2.1
CENPFP49454 MTCYBP7-201ENST00000419540 1134 ntBASIC1.91□□□□□ -2.1
CENPFP49454 AC244505.5-201ENST00000443639 207 ntBASIC1.91□□□□□ -2.1
CENPFP49454 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
CENPFP49454 AC022336.2-201ENST00000568966 2538 ntBASIC1.9□□□□□ -2.1
CENPFP49454 RNU6-1080P-201ENST00000383982 107 ntBASIC1.9□□□□□ -2.11
CENPFP49454 MIR1323-201ENST00000408090 73 ntBASIC1.9□□□□□ -2.11
CENPFP49454 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.9□□□□□ -2.11
CENPFP49454 EIF1AXP1-201ENST00000419267 435 ntBASIC1.9□□□□□ -2.11
CENPFP49454 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.9□□□□□ -2.11
CENPFP49454 RNA5SP402-201ENST00000517148 110 ntBASIC1.9□□□□□ -2.11
CENPFP49454 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.9□□□□□ -2.11
CENPFP49454 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.9□□□□□ -2.11
CENPFP49454 RPL7P46-201ENST00000425129 740 ntBASIC1.9□□□□□ -2.11
CENPFP49454 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.9□□□□□ -2.11
CENPFP49454 AC093331.1-201ENST00000521474 169 ntBASIC1.9□□□□□ -2.11
CENPFP49454 RNU6-60P-201ENST00000364792 103 ntBASIC1.89□□□□□ -2.11
CENPFP49454 RNA5SP160-201ENST00000364866 120 ntBASIC1.89□□□□□ -2.11
CENPFP49454 HMGB3P15-201ENST00000507326 574 ntBASIC1.89□□□□□ -2.11
CENPFP49454 AC104581.2-201ENST00000572227 430 ntBASIC1.89□□□□□ -2.11
CENPFP49454 AC124283.4-201ENST00000581815 456 ntBASIC1.89□□□□□ -2.11
CENPFP49454 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CENPFP49454 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.89□□□□□ -2.11
CENPFP49454 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CENPFP49454 Y_RNA.393-201ENST00000383936 102 ntBASIC1.89□□□□□ -2.11
CENPFP49454 DHFRP5-201ENST00000406944 564 ntBASIC1.89□□□□□ -2.11
CENPFP49454 GTF2IP9-201ENST00000502460 301 ntBASIC1.89□□□□□ -2.11
CENPFP49454 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.89□□□□□ -2.11
CENPFP49454 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.89□□□□□ -2.11
CENPFP49454 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.89□□□□□ -2.11
CENPFP49454 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.89□□□□□ -2.11
CENPFP49454 AC245100.2-201ENST00000454544 1679 ntBASIC1.89□□□□□ -2.11
CENPFP49454 Z98749.2-208ENST00000381646 500 ntBASIC1.89□□□□□ -2.11
CENPFP49454 DNAJC19P6-201ENST00000401853 280 ntBASIC1.89□□□□□ -2.11
CENPFP49454 SRIP3-201ENST00000413200 219 ntBASIC1.89□□□□□ -2.11
CENPFP49454 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.89□□□□□ -2.11
CENPFP49454 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.89□□□□□ -2.11
CENPFP49454 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CENPFP49454 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.88□□□□□ -2.11
CENPFP49454 RNA5SP338-201ENST00000410495 85 ntBASIC1.88□□□□□ -2.11
CENPFP49454 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.88□□□□□ -2.11
CENPFP49454 EXTL2P1-201ENST00000446218 416 ntBASIC1.88□□□□□ -2.11
CENPFP49454 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.88□□□□□ -2.11
CENPFP49454 SNORD53B-201ENST00000577887 78 ntBASIC1.88□□□□□ -2.11
CENPFP49454 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms