Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL28P46779 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.84□□□□□ -2.11
RPL28P46779 Z82190.1-201ENST00000454534 490 ntBASIC1.84□□□□□ -2.11
RPL28P46779 GTF2IP12-201ENST00000456547 356 ntBASIC1.84□□□□□ -2.11
RPL28P46779 AC083906.5-201ENST00000503722 328 ntBASIC1.84□□□□□ -2.11
RPL28P46779 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC1.84□□□□□ -2.11
RPL28P46779 AC048346.1-201ENST00000510247 144 ntBASIC1.84□□□□□ -2.11
RPL28P46779 AC109471.1-201ENST00000511631 612 ntBASIC1.84□□□□□ -2.11
RPL28P46779 SNORA76.2-201ENST00000517095 137 ntBASIC1.84□□□□□ -2.11
RPL28P46779 SNORA31.21-201ENST00000517180 77 ntBASIC1.84□□□□□ -2.11
RPL28P46779 RN7SKP40-201ENST00000517211 242 ntBASIC1.84□□□□□ -2.11
RPL28P46779 AP003102.1-201ENST00000525638 661 ntBASIC1.84□□□□□ -2.11
RPL28P46779 PSMA2P1-201ENST00000526365 646 ntBASIC1.84□□□□□ -2.11
RPL28P46779 AP000916.1-201ENST00000533869 835 ntBASIC1.84□□□□□ -2.11
RPL28P46779 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL28P46779 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.84□□□□□ -2.11
RPL28P46779 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL28P46779 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL28P46779 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL28P46779 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL28P46779 RPL12P50-201ENST00000603116 116 ntBASIC1.84□□□□□ -2.11
RPL28P46779 AC005046.1-201ENST00000608515 625 ntBASIC1.84□□□□□ -2.11
RPL28P46779 VN1R9P-201ENST00000614184 867 ntBASIC1.84□□□□□ -2.11
RPL28P46779 AL356585.4-201ENST00000623078 1229 ntBASIC1.84□□□□□ -2.11
RPL28P46779 ZNF271P-202ENST00000465539 1970 ntBASIC1.84□□□□□ -2.11
RPL28P46779 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC1.84□□□□□ -2.11
RPL28P46779 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
RPL28P46779 AC009812.4-201ENST00000569134 1805 ntBASIC1.84□□□□□ -2.12
RPL28P46779 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RPL28P46779 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.83□□□□□ -2.12
RPL28P46779 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RPL28P46779 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RPL28P46779 AC008568.2-201ENST00000623862 2313 ntBASIC1.83□□□□□ -2.12
RPL28P46779 MTCO1P23-201ENST00000415223 1526 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AL672167.1-206ENST00000356293 943 ntBASIC1.83□□□□□ -2.12
RPL28P46779 MIR422A-201ENST00000362286 90 ntBASIC1.83□□□□□ -2.12
RPL28P46779 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RPL28P46779 RNA5SP171-201ENST00000391071 115 ntBASIC1.83□□□□□ -2.12
RPL28P46779 RNU6-1197P-201ENST00000391183 107 ntBASIC1.83□□□□□ -2.12
RPL28P46779 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.83□□□□□ -2.12
RPL28P46779 RNU2-25P-201ENST00000411041 191 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.83□□□□□ -2.12
RPL28P46779 AL445183.3-201ENST00000414168 502 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AC008173.1-201ENST00000418901 264 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.83□□□□□ -2.12
RPL28P46779 AL389915.1-201ENST00000422463 466 ntBASIC1.83□□□□□ -2.12
RPL28P46779 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.83□□□□□ -2.12
RPL28P46779 AL365496.1-201ENST00000426885 215 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AL512649.1-201ENST00000428997 581 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.83□□□□□ -2.12
RPL28P46779 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.83□□□□□ -2.12
RPL28P46779 HSFY3P-201ENST00000444242 1191 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AL109741.2-201ENST00000455561 343 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.83□□□□□ -2.12
RPL28P46779 AC003982.1-202ENST00000469928 248 ntBASIC1.83□□□□□ -2.12
RPL28P46779 SRIP1-201ENST00000489235 288 ntBASIC1.83□□□□□ -2.12
RPL28P46779 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RPL28P46779 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.83□□□□□ -2.12
RPL28P46779 RN7SL504P-201ENST00000494496 287 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.83□□□□□ -2.12
RPL28P46779 AC084024.2-201ENST00000503480 791 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.83□□□□□ -2.12
RPL28P46779 RNA5SP135-201ENST00000517019 125 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AC009812.2-201ENST00000517657 457 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.83□□□□□ -2.12
RPL28P46779 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RPL28P46779 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.83□□□□□ -2.12
RPL28P46779 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.83□□□□□ -2.12
RPL28P46779 HMGB1P14-201ENST00000557424 591 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.83□□□□□ -2.12
RPL28P46779 HMGB1P6-201ENST00000569046 646 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC1.83□□□□□ -2.12
RPL28P46779 AC006539.2-201ENST00000601729 572 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AL049779.4-201ENST00000604500 156 ntBASIC1.83□□□□□ -2.12
RPL28P46779 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.83□□□□□ -2.12
RPL28P46779 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC1.83□□□□□ -2.12
RPL28P46779 AL161734.1-201ENST00000609720 557 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AC104237.2-201ENST00000612456 443 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AC103798.2-201ENST00000624292 632 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AC004777.1-201ENST00000624317 287 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.83□□□□□ -2.12
RPL28P46779 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.83□□□□□ -2.12
RPL28P46779 AP000526.1-201ENST00000603308 1388 ntBASIC1.83□□□□□ -2.12
RPL28P46779 AC073346.2-201ENST00000624724 2058 ntBASIC1.82□□□□□ -2.12
RPL28P46779 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPL28P46779 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RPL28P46779 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPL28P46779 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.82□□□□□ -2.12
RPL28P46779 OR5T3-201ENST00000303059 1023 ntBASIC1.82□□□□□ -2.12
RPL28P46779 RNU1-140P-201ENST00000365040 165 ntBASIC1.82□□□□□ -2.12
RPL28P46779 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
RPL28P46779 RNU6-198P-201ENST00000384258 104 ntBASIC1.82□□□□□ -2.12
RPL28P46779 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.82□□□□□ -2.12
RPL28P46779 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.82□□□□□ -2.12
RPL28P46779 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RPL28P46779 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.82□□□□□ -2.12
RPL28P46779 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.82□□□□□ -2.12
RPL28P46779 AC092573.2-201ENST00000434546 243 ntBASIC1.82□□□□□ -2.12
RPL28P46779 CR769767.1-201ENST00000436337 346 ntBASIC1.82□□□□□ -2.12
RPL28P46779 RAC1P7-201ENST00000445367 377 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms