Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.91□□□□□ -1.94
RORAP35398 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.91□□□□□ -1.94
RORAP35398 AC078899.3-201ENST00000599065 212 ntBASIC2.91□□□□□ -1.94
RORAP35398 AL033523.1-201ENST00000605153 153 ntBASIC2.91□□□□□ -1.94
RORAP35398 AC106028.5-201ENST00000610332 395 ntBASIC2.91□□□□□ -1.94
RORAP35398 AC040168.1-201ENST00000623594 991 ntBASIC2.91□□□□□ -1.94
RORAP35398 AC006386.2-201ENST00000624491 75 ntBASIC2.91□□□□□ -1.94
RORAP35398 AC012005.1-201ENST00000624575 75 ntBASIC2.91□□□□□ -1.94
RORAP35398 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.91□□□□□ -1.94
RORAP35398 AC084035.1-201ENST00000634543 607 ntBASIC2.91□□□□□ -1.94
RORAP35398 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.91□□□□□ -1.94
RORAP35398 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
RORAP35398 NUP58P1-201ENST00000502546 1738 ntBASIC2.9□□□□□ -1.94
RORAP35398 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RORAP35398 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.9□□□□□ -1.95
RORAP35398 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RORAP35398 SNORD67-201ENST00000390833 111 ntBASIC2.9□□□□□ -1.95
RORAP35398 AC110754.1-201ENST00000399740 601 ntBASIC2.9□□□□□ -1.95
RORAP35398 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.9□□□□□ -1.95
RORAP35398 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.9□□□□□ -1.95
RORAP35398 RPL7P27-201ENST00000403775 720 ntBASIC2.9□□□□□ -1.95
RORAP35398 AC069282.1-201ENST00000411911 526 ntBASIC2.9□□□□□ -1.95
RORAP35398 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.9□□□□□ -1.95
RORAP35398 USP9YP21-201ENST00000420603 432 ntBASIC2.9□□□□□ -1.95
RORAP35398 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.9□□□□□ -1.95
RORAP35398 MTCO1P48-201ENST00000448024 1096 ntBASIC2.9□□□□□ -1.95
RORAP35398 AL031183.1-201ENST00000457667 207 ntBASIC2.9□□□□□ -1.95
RORAP35398 AC096576.1-201ENST00000489014 359 ntBASIC2.9□□□□□ -1.95
RORAP35398 AC104629.1-201ENST00000494226 508 ntBASIC2.9□□□□□ -1.95
RORAP35398 BOLA3P3-201ENST00000505182 232 ntBASIC2.9□□□□□ -1.95
RORAP35398 AC069306.1-201ENST00000507006 843 ntBASIC2.9□□□□□ -1.95
RORAP35398 AC010374.2-201ENST00000512933 535 ntBASIC2.9□□□□□ -1.95
RORAP35398 RNU1-143P-201ENST00000516296 146 ntBASIC2.9□□□□□ -1.95
RORAP35398 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.9□□□□□ -1.95
RORAP35398 MTCO3P15-201ENST00000526563 574 ntBASIC2.9□□□□□ -1.95
RORAP35398 MTCYBP27-201ENST00000555160 670 ntBASIC2.9□□□□□ -1.95
RORAP35398 AL157394.1-201ENST00000562983 1224 ntBASIC2.9□□□□□ -1.95
RORAP35398 AP005205.1-201ENST00000563503 508 ntBASIC2.9□□□□□ -1.95
RORAP35398 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.9□□□□□ -1.95
RORAP35398 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.9□□□□□ -1.95
RORAP35398 AC245036.5-201ENST00000596330 847 ntBASIC2.9□□□□□ -1.95
RORAP35398 AC068620.3-201ENST00000602749 560 ntBASIC2.9□□□□□ -1.95
RORAP35398 AP002802.2-201ENST00000605877 235 ntBASIC2.9□□□□□ -1.95
RORAP35398 AC091946.2-201ENST00000606105 291 ntBASIC2.9□□□□□ -1.95
RORAP35398 AL583856.2-201ENST00000606298 543 ntBASIC2.9□□□□□ -1.95
RORAP35398 AC124016.2-201ENST00000610058 665 ntBASIC2.9□□□□□ -1.95
RORAP35398 U1.23-201ENST00000610293 146 ntBASIC2.9□□□□□ -1.95
RORAP35398 AC131902.3-201ENST00000611767 581 ntBASIC2.9□□□□□ -1.95
RORAP35398 RNU1-68P-201ENST00000615382 146 ntBASIC2.9□□□□□ -1.95
RORAP35398 U1.39-201ENST00000621562 146 ntBASIC2.9□□□□□ -1.95
RORAP35398 SCARNA15.3-201ENST00000626315 122 ntBASIC2.9□□□□□ -1.95
RORAP35398 SCARNA4.1-201ENST00000628597 123 ntBASIC2.9□□□□□ -1.95
RORAP35398 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.9□□□□□ -1.95
RORAP35398 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RORAP35398 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RORAP35398 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.89□□□□□ -1.95
RORAP35398 AL035425.3-201ENST00000564206 4996 ntBASIC2.89□□□□□ -1.95
RORAP35398 MIR22-201ENST00000362190 85 ntBASIC2.89□□□□□ -1.95
RORAP35398 RNU6-236P-201ENST00000363886 106 ntBASIC2.89□□□□□ -1.95
RORAP35398 RNA5SP139-201ENST00000364340 117 ntBASIC2.89□□□□□ -1.95
RORAP35398 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.89□□□□□ -1.95
RORAP35398 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
RORAP35398 SNORA26.7-201ENST00000391288 122 ntBASIC2.89□□□□□ -1.95
RORAP35398 AC016769.3-201ENST00000396562 315 ntBASIC2.89□□□□□ -1.95
RORAP35398 ARF4P3-201ENST00000397387 509 ntBASIC2.89□□□□□ -1.95
RORAP35398 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.89□□□□□ -1.95
RORAP35398 AC099677.1-201ENST00000420575 175 ntBASIC2.89□□□□□ -1.95
RORAP35398 MTCO3P1-205ENST00000422088 832 ntBASIC2.89□□□□□ -1.95
RORAP35398 TMEM167AP1-201ENST00000423409 219 ntBASIC2.89□□□□□ -1.95
RORAP35398 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.89□□□□□ -1.95
RORAP35398 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.89□□□□□ -1.95
RORAP35398 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.89□□□□□ -1.95
RORAP35398 PTGES3P1-201ENST00000439531 483 ntBASIC2.89□□□□□ -1.95
RORAP35398 AC112492.1-201ENST00000449607 712 ntBASIC2.89□□□□□ -1.95
RORAP35398 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.89□□□□□ -1.95
RORAP35398 AL590639.1-201ENST00000456484 337 ntBASIC2.89□□□□□ -1.95
RORAP35398 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.89□□□□□ -1.95
RORAP35398 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RORAP35398 OR2A20P-203ENST00000498397 1268 ntBASIC2.89□□□□□ -1.95
RORAP35398 AC118282.1-201ENST00000506408 765 ntBASIC2.89□□□□□ -1.95
RORAP35398 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.89□□□□□ -1.95
RORAP35398 AC104417.1-201ENST00000523974 751 ntBASIC2.89□□□□□ -1.95
RORAP35398 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.89□□□□□ -1.95
RORAP35398 AC008127.2-201ENST00000549925 1075 ntBASIC2.89□□□□□ -1.95
RORAP35398 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.89□□□□□ -1.95
RORAP35398 AC126365.2-201ENST00000580630 379 ntBASIC2.89□□□□□ -1.95
RORAP35398 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.89□□□□□ -1.95
RORAP35398 AC231759.1-201ENST00000616455 597 ntBASIC2.89□□□□□ -1.95
RORAP35398 AC010975.3-201ENST00000618727 978 ntBASIC2.89□□□□□ -1.95
RORAP35398 AC080188.3-201ENST00000624842 748 ntBASIC2.89□□□□□ -1.95
RORAP35398 AC126544.2-201ENST00000625174 749 ntBASIC2.89□□□□□ -1.95
RORAP35398 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.89□□□□□ -1.95
RORAP35398 ZNF663P-202ENST00000641770 1131 ntBASIC2.89□□□□□ -1.95
RORAP35398 MTND5P24-201ENST00000438892 1767 ntBASIC2.89□□□□□ -1.95
RORAP35398 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RORAP35398 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.88□□□□□ -1.95
RORAP35398 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RORAP35398 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RORAP35398 AL049780.3-201ENST00000624612 1583 ntBASIC2.88□□□□□ -1.95
RORAP35398 AC000403.1-201ENST00000613696 3585 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms