Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AL356057.2-201ENST00000403318 432 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 AL513175.2-201ENST00000422071 443 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.02□□□□□ -2.09
HLA-DMBP28068 SUMO1P4-201ENST00000429430 302 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DMBP28068 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DMBP28068 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.02□□□□□ -2.09
HLA-DMBP28068 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DMBP28068 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.02□□□□□ -2.09
HLA-DMBP28068 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DMBP28068 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DMBP28068 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DMBP28068 AC024224.1-201ENST00000538284 609 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HLA-DMBP28068 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DMBP28068 FAM60BP-201ENST00000578364 658 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DMBP28068 MIR5194-201ENST00000582634 120 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DMBP28068 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DMBP28068 AC012669.1-201ENST00000603209 283 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 AC006023.1-201ENST00000603944 259 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 HSPE1P7-201ENST00000604681 321 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 AL035413.2-201ENST00000604801 525 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 BNIP3P4-201ENST00000604946 565 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 AC008277.2-201ENST00000605196 797 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 AC007619.2-201ENST00000605743 379 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 OR2AS2P-201ENST00000606902 342 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 AC106028.5-201ENST00000610332 395 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DMBP28068 AC073569.3-201ENST00000619055 682 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HLA-DMBP28068 MFSD8-245ENST00000641743 948 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DMBP28068 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.02□□□□□ -2.09
HLA-DMBP28068 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DMBP28068 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DMBP28068 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DMBP28068 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DMBP28068 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DMBP28068 RNU6-1180P-201ENST00000364935 107 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 SNORD21-201ENST00000383953 95 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 TATDN1P1-201ENST00000414123 891 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 MTCO1P39-201ENST00000426148 480 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 AL035410.1-201ENST00000427409 427 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 AC093422.3-201ENST00000428506 305 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 MTND4LP14-201ENST00000429447 288 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 CR769767.1-201ENST00000436337 346 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 LSM1P1-201ENST00000438629 273 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 HSFY3P-201ENST00000444242 1191 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 OR6K5P-201ENST00000447050 945 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 PABPC1P3-201ENST00000469174 459 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 RPL37P25-201ENST00000507308 276 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 AC087373.1-201ENST00000524920 491 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 AP001804.3-201ENST00000525146 880 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DMBP28068 MED28P6-201ENST00000558776 231 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 MIR4319-201ENST00000577285 85 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 ATP1B3P1-201ENST00000605365 821 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 AC016911.1-201ENST00000613297 452 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 AC040168.1-201ENST00000623594 991 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 AP003485.2-201ENST00000623636 610 ntBASIC2.01□□□□□ -2.09
HLA-DMBP28068 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DMBP28068 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DMBP28068 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DMBP28068 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.01□□□□□ -2.09
HLA-DMBP28068 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DMBP28068 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DMBP28068 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
HLA-DMBP28068 RNA5SP139-201ENST00000364340 117 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2□□□□□ -2.09
HLA-DMBP28068 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
HLA-DMBP28068 UBE2V1P2-201ENST00000397758 440 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2□□□□□ -2.09
HLA-DMBP28068 RNU6-77P-201ENST00000410554 91 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 RNA5SP184-201ENST00000411071 108 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 AL355994.1-201ENST00000424379 260 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DMBP28068 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DMBP28068 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DMBP28068 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms