Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL022578.1-201ENST00000439330 1433 ntBASIC3.69□□□□□ -1.82
LDLRP01130 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LDLRP01130 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
LDLRP01130 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRP01130 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRP01130 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
LDLRP01130 AF127577.6-201ENST00000623352 2191 ntBASIC3.68□□□□□ -1.82
LDLRP01130 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRP01130 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRP01130 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRP01130 RNU6-289P-201ENST00000364093 107 ntBASIC3.68□□□□□ -1.82
LDLRP01130 RNU6-660P-201ENST00000364566 109 ntBASIC3.68□□□□□ -1.82
LDLRP01130 RNA5SP88-201ENST00000365560 109 ntBASIC3.68□□□□□ -1.82
LDLRP01130 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRP01130 Y_RNA.517-201ENST00000384551 106 ntBASIC3.68□□□□□ -1.82
LDLRP01130 SNORA26.8-201ENST00000391306 124 ntBASIC3.68□□□□□ -1.82
LDLRP01130 NDUFB4P4-201ENST00000404822 243 ntBASIC3.68□□□□□ -1.82
LDLRP01130 RN7SKP156-201ENST00000410308 342 ntBASIC3.68□□□□□ -1.82
LDLRP01130 MTND1P23-201ENST00000416931 372 ntBASIC3.68□□□□□ -1.82
LDLRP01130 RPL30P16-201ENST00000419341 429 ntBASIC3.68□□□□□ -1.82
LDLRP01130 FNDC3CP-201ENST00000420795 1155 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRP01130 PSMA6P3-201ENST00000428242 164 ntBASIC3.68□□□□□ -1.82
LDLRP01130 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRP01130 AL590103.1-201ENST00000434488 307 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRP01130 MTND4P25-201ENST00000441039 533 ntBASIC3.68□□□□□ -1.82
LDLRP01130 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.68□□□□□ -1.82
LDLRP01130 RPL38P1-201ENST00000460914 211 ntBASIC3.68□□□□□ -1.82
LDLRP01130 RPL23AP62-201ENST00000463396 453 ntBASIC3.68□□□□□ -1.82
LDLRP01130 SNRPGP3-201ENST00000469405 227 ntBASIC3.68□□□□□ -1.82
LDLRP01130 TRBV12-2-201ENST00000489763 344 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AL024509.2-201ENST00000493462 493 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRP01130 OR5H5P-201ENST00000503164 928 ntBASIC3.68□□□□□ -1.82
LDLRP01130 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRP01130 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.68□□□□□ -1.82
LDLRP01130 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRP01130 RNU1-95P-201ENST00000516357 160 ntBASIC3.68□□□□□ -1.82
LDLRP01130 RNU1-128P-201ENST00000516704 160 ntBASIC3.68□□□□□ -1.82
LDLRP01130 Y_RNA.695-201ENST00000516715 107 ntBASIC3.68□□□□□ -1.82
LDLRP01130 RNU4-60P-201ENST00000517239 135 ntBASIC3.68□□□□□ -1.82
LDLRP01130 MTND4LP26-201ENST00000518144 282 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRP01130 AC022861.1-201ENST00000522981 663 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRP01130 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.68□□□□□ -1.82
LDLRP01130 AP002963.1-201ENST00000530590 184 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRP01130 AC007954.1-201ENST00000554198 494 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AL121576.1-201ENST00000556055 276 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AC090877.1-201ENST00000561418 344 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.68□□□□□ -1.82
LDLRP01130 MIR5186-201ENST00000577504 120 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRP01130 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRP01130 AC011471.1-201ENST00000585766 187 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AC244505.7-201ENST00000599675 272 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.68□□□□□ -1.82
LDLRP01130 WISP1-OT1-201ENST00000602893 642 ntBASIC3.68□□□□□ -1.82
LDLRP01130 RNU6-88P-201ENST00000606801 100 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AC087241.4-201ENST00000612441 480 ntBASIC3.68□□□□□ -1.82
LDLRP01130 AL034408.1-202ENST00000636088 415 ntBASIC3.68□□□□□ -1.82
LDLRP01130 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.68□□□□□ -1.82
LDLRP01130 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRP01130 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRP01130 NUP58P1-201ENST00000502546 1738 ntBASIC3.67□□□□□ -1.82
LDLRP01130 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 Y_RNA.41-201ENST00000362646 102 ntBASIC3.67□□□□□ -1.82
LDLRP01130 RNA5SP189-201ENST00000364920 115 ntBASIC3.67□□□□□ -1.82
LDLRP01130 Y_RNA.302-201ENST00000364997 102 ntBASIC3.67□□□□□ -1.82
LDLRP01130 RNU6-1283P-201ENST00000365314 105 ntBASIC3.67□□□□□ -1.82
LDLRP01130 RNU6-723P-201ENST00000383973 107 ntBASIC3.67□□□□□ -1.82
LDLRP01130 SNORA5A-201ENST00000384111 134 ntBASIC3.67□□□□□ -1.82
LDLRP01130 RNU6-339P-201ENST00000384310 107 ntBASIC3.67□□□□□ -1.82
LDLRP01130 Y_RNA.516-201ENST00000384541 124 ntBASIC3.67□□□□□ -1.82
LDLRP01130 MT-TH-201ENST00000387441 69 ntBASIC3.67□□□□□ -1.82
LDLRP01130 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LDLRP01130 RNU6-952P-201ENST00000391164 108 ntBASIC3.67□□□□□ -1.82
LDLRP01130 AL031679.1-201ENST00000400616 525 ntBASIC3.67□□□□□ -1.82
LDLRP01130 HMGB1P17-201ENST00000403495 628 ntBASIC3.67□□□□□ -1.82
LDLRP01130 RNU4-78P-201ENST00000410940 126 ntBASIC3.67□□□□□ -1.82
LDLRP01130 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.67□□□□□ -1.82
LDLRP01130 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.67□□□□□ -1.82
LDLRP01130 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.67□□□□□ -1.82
LDLRP01130 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.67□□□□□ -1.82
LDLRP01130 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
LDLRP01130 AC127526.1-201ENST00000417526 366 ntBASIC3.67□□□□□ -1.82
LDLRP01130 AC083875.1-201ENST00000419509 405 ntBASIC3.67□□□□□ -1.82
LDLRP01130 AC012065.2-201ENST00000421295 375 ntBASIC3.67□□□□□ -1.82
LDLRP01130 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.67□□□□□ -1.82
LDLRP01130 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRP01130 AC083863.1-201ENST00000438811 231 ntBASIC3.67□□□□□ -1.82
LDLRP01130 HSPE1P28-201ENST00000443139 211 ntBASIC3.67□□□□□ -1.82
LDLRP01130 RPS4XP4-201ENST00000443195 763 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms