Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.56□□□□□ -1.68
CDKL5O76039 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDKL5O76039 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.56□□□□□ -1.68
CDKL5O76039 AC068305.1-201ENST00000497406 726 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 AC091951.2-201ENST00000500762 203 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 AC112204.1-201ENST00000502591 103 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 TMEM251P1-201ENST00000503717 318 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 KCTD9P5-201ENST00000504141 1170 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.56□□□□□ -1.68
CDKL5O76039 AC046134.1-201ENST00000514454 666 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.56□□□□□ -1.68
CDKL5O76039 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.56□□□□□ -1.68
CDKL5O76039 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.56□□□□□ -1.68
CDKL5O76039 RNU6-358P-201ENST00000516564 75 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 OR4A12P-201ENST00000530847 918 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.56□□□□□ -1.68
CDKL5O76039 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.56□□□□□ -1.68
CDKL5O76039 AL049634.3-201ENST00000604968 457 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 AL365503.1-201ENST00000605247 905 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 AL390208.1-201ENST00000605885 644 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 AC012150.2-201ENST00000621300 544 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 AC000123.2-201ENST00000623124 461 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 AC117529.2-201ENST00000512159 2068 ntBASIC4.56□□□□□ -1.68
CDKL5O76039 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDKL5O76039 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.55□□□□□ -1.68
CDKL5O76039 Y_RNA.11-201ENST00000362375 109 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 Y_RNA.89-201ENST00000363031 102 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 Y_RNA.295-201ENST00000364918 102 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 DHFRP6-201ENST00000401776 268 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDKL5O76039 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.55□□□□□ -1.68
CDKL5O76039 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 OR51A5P-201ENST00000415429 942 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.55□□□□□ -1.68
CDKL5O76039 SPA17P1-201ENST00000416656 452 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CDKL5O76039 AC012498.1-201ENST00000424037 437 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 ISCA1P6-201ENST00000427740 390 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.55□□□□□ -1.68
CDKL5O76039 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.55□□□□□ -1.68
CDKL5O76039 RPL37P1-201ENST00000432310 284 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 TBCAP1-201ENST00000436520 327 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 MTND4LP16-201ENST00000440828 295 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 MTND5P14-201ENST00000441481 1267 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.55□□□□□ -1.68
CDKL5O76039 AL500522.2-201ENST00000448562 343 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 RPS17P13-201ENST00000448974 407 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.55□□□□□ -1.68
CDKL5O76039 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDKL5O76039 MTND1P3-201ENST00000484956 952 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.55□□□□□ -1.68
CDKL5O76039 MIR2114-201ENST00000516645 80 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 RNU6-347P-201ENST00000516658 105 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 RNU2-46P-201ENST00000517038 113 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.55□□□□□ -1.68
CDKL5O76039 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.55□□□□□ -1.68
CDKL5O76039 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.55□□□□□ -1.68
CDKL5O76039 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.55□□□□□ -1.68
CDKL5O76039 RAB11AP2-201ENST00000545905 639 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 AL157394.1-201ENST00000562983 1224 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 AL133457.1-201ENST00000564251 987 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.55□□□□□ -1.68
CDKL5O76039 LARP7P2-201ENST00000575306 125 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 MAGOH2P-202ENST00000584384 429 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 AC020914.4-201ENST00000597690 277 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 AL590392.1-201ENST00000604960 446 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.55□□□□□ -1.68
CDKL5O76039 AC083809.1-201ENST00000615051 472 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.55□□□□□ -1.68
CDKL5O76039 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.55□□□□□ -1.68
CDKL5O76039 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.55□□□□□ -1.68
CDKL5O76039 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CDKL5O76039 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDKL5O76039 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDKL5O76039 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDKL5O76039 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.55□□□□□ -1.68
CDKL5O76039 AL022578.1-201ENST00000439330 1433 ntBASIC4.55□□□□□ -1.68
CDKL5O76039 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL5O76039 MTND4P12-201ENST00000498999 1377 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.54□□□□□ -1.68
CDKL5O76039 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CDKL5O76039 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL5O76039 RNU6-181P-201ENST00000363225 107 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 RNA5SP97-201ENST00000365006 84 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 AC068538.1-201ENST00000376856 336 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 RNU6-921P-201ENST00000384361 107 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 RNU6-952P-201ENST00000391164 108 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.54□□□□□ -1.68
CDKL5O76039 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.54□□□□□ -1.68
CDKL5O76039 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.54□□□□□ -1.68
CDKL5O76039 MTCO1P20-201ENST00000425366 358 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.54□□□□□ -1.68
CDKL5O76039 RPL23AP16-201ENST00000441715 421 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 ELOCP23-201ENST00000452014 332 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.54□□□□□ -1.68
CDKL5O76039 AC099563.1-201ENST00000456086 418 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.54□□□□□ -1.68
CDKL5O76039 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms