Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RNU6-359P-201ENST00000365466 108 ntBASIC3.32□□□□□ -1.88
SNX3O60493 OR6C69P-201ENST00000394268 893 ntBASIC3.32□□□□□ -1.88
SNX3O60493 RPS3AP26-201ENST00000398259 784 ntBASIC3.32□□□□□ -1.88
SNX3O60493 RNA5SP44-201ENST00000410446 133 ntBASIC3.32□□□□□ -1.88
SNX3O60493 RNU2-37P-201ENST00000410695 177 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AC244505.4-201ENST00000434905 287 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.32□□□□□ -1.88
SNX3O60493 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.32□□□□□ -1.88
SNX3O60493 SSXP5-201ENST00000443473 287 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AC239367.2-201ENST00000447309 705 ntBASIC3.32□□□□□ -1.88
SNX3O60493 Z99127.3-201ENST00000448158 395 ntBASIC3.32□□□□□ -1.88
SNX3O60493 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.32□□□□□ -1.88
SNX3O60493 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AC104308.1-201ENST00000454621 333 ntBASIC3.32□□□□□ -1.88
SNX3O60493 SNORD121B-201ENST00000458838 81 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AL133162.1-201ENST00000463228 453 ntBASIC3.32□□□□□ -1.88
SNX3O60493 VN1R17P-201ENST00000472048 1090 ntBASIC3.32□□□□□ -1.88
SNX3O60493 RPL30P6-201ENST00000475925 342 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AC022447.3-201ENST00000506865 495 ntBASIC3.32□□□□□ -1.88
SNX3O60493 MTND1P22-201ENST00000510572 951 ntBASIC3.32□□□□□ -1.88
SNX3O60493 FTH1P21-201ENST00000512179 511 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.32□□□□□ -1.88
SNX3O60493 RNU6-528P-201ENST00000516926 100 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.32□□□□□ -1.88
SNX3O60493 AC007834.2-201ENST00000536310 343 ntBASIC3.32□□□□□ -1.88
SNX3O60493 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.32□□□□□ -1.88
SNX3O60493 CR383656.6-201ENST00000550518 394 ntBASIC3.32□□□□□ -1.88
SNX3O60493 FAM60BP-201ENST00000578364 658 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.32□□□□□ -1.88
SNX3O60493 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.32□□□□□ -1.88
SNX3O60493 SNORD84-203ENST00000584275 78 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AC013444.2-201ENST00000603317 787 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AL357094.1-201ENST00000603845 844 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AC008745.1-201ENST00000604064 271 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AL022099.1-201ENST00000604551 712 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AC122133.1-201ENST00000613964 233 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AL590240.3-201ENST00000621416 943 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AC022079.1-201ENST00000621546 602 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AL360181.4-201ENST00000621752 134 ntBASIC3.32□□□□□ -1.88
SNX3O60493 AL356266.1-201ENST00000623311 483 ntBASIC3.32□□□□□ -1.88
SNX3O60493 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.32□□□□□ -1.88
SNX3O60493 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNX3O60493 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SNX3O60493 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.32□□□□□ -1.88
SNX3O60493 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.32□□□□□ -1.88
SNX3O60493 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SNX3O60493 AC093908.1-201ENST00000623125 8092 ntBASIC3.32□□□□□ -1.88
SNX3O60493 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNX3O60493 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.31□□□□□ -1.88
SNX3O60493 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX3O60493 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX3O60493 Y_RNA.560-201ENST00000384689 102 ntBASIC3.31□□□□□ -1.88
SNX3O60493 SNORA46-201ENST00000384762 135 ntBASIC3.31□□□□□ -1.88
SNX3O60493 RNU6-882P-201ENST00000391025 103 ntBASIC3.31□□□□□ -1.88
SNX3O60493 MIR937-201ENST00000401271 86 ntBASIC3.31□□□□□ -1.88
SNX3O60493 MIR1305-201ENST00000408300 86 ntBASIC3.31□□□□□ -1.88
SNX3O60493 DBIP2-201ENST00000419076 262 ntBASIC3.31□□□□□ -1.88
SNX3O60493 MTCO1P39-201ENST00000426148 480 ntBASIC3.31□□□□□ -1.88
SNX3O60493 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX3O60493 LARP1BP3-201ENST00000437229 869 ntBASIC3.31□□□□□ -1.88
SNX3O60493 AL831737.1-201ENST00000441288 271 ntBASIC3.31□□□□□ -1.88
SNX3O60493 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX3O60493 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX3O60493 OR6K1P-201ENST00000456766 971 ntBASIC3.31□□□□□ -1.88
SNX3O60493 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.31□□□□□ -1.88
SNX3O60493 RN7SL459P-201ENST00000481078 302 ntBASIC3.31□□□□□ -1.88
SNX3O60493 AC021382.1-201ENST00000483523 359 ntBASIC3.31□□□□□ -1.88
SNX3O60493 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.31□□□□□ -1.88
SNX3O60493 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX3O60493 MLLT10P2-201ENST00000506434 249 ntBASIC3.31□□□□□ -1.88
SNX3O60493 AC111000.2-201ENST00000507775 550 ntBASIC3.31□□□□□ -1.88
SNX3O60493 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.31□□□□□ -1.88
SNX3O60493 AC119751.5-201ENST00000514077 770 ntBASIC3.31□□□□□ -1.88
SNX3O60493 MTND2P38-201ENST00000522536 667 ntBASIC3.31□□□□□ -1.88
SNX3O60493 SNRPGP16-201ENST00000533275 226 ntBASIC3.31□□□□□ -1.88
SNX3O60493 AC068587.4-201ENST00000533893 186 ntBASIC3.31□□□□□ -1.88
SNX3O60493 OSBPL9P5-201ENST00000542581 171 ntBASIC3.31□□□□□ -1.88
SNX3O60493 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.31□□□□□ -1.88
SNX3O60493 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SNX3O60493 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX3O60493 BNIP3P5-201ENST00000562290 498 ntBASIC3.31□□□□□ -1.88
SNX3O60493 AP001004.1-201ENST00000582468 324 ntBASIC3.31□□□□□ -1.88
SNX3O60493 AC007448.1-201ENST00000582714 234 ntBASIC3.31□□□□□ -1.88
SNX3O60493 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.31□□□□□ -1.88
SNX3O60493 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX3O60493 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX3O60493 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX3O60493 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.31□□□□□ -1.88
SNX3O60493 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX3O60493 MTCYBP22-201ENST00000603788 447 ntBASIC3.31□□□□□ -1.88
SNX3O60493 AC011451.2-201ENST00000604303 598 ntBASIC3.31□□□□□ -1.88
SNX3O60493 BCRP9-201ENST00000605312 388 ntBASIC3.31□□□□□ -1.88
SNX3O60493 AL391497.1-201ENST00000608671 547 ntBASIC3.31□□□□□ -1.88
SNX3O60493 AC106028.5-201ENST00000610332 395 ntBASIC3.31□□□□□ -1.88
SNX3O60493 MIR6820-201ENST00000611508 62 ntBASIC3.31□□□□□ -1.88
SNX3O60493 U4.6-201ENST00000621618 127 ntBASIC3.31□□□□□ -1.88
SNX3O60493 AF246928.1-201ENST00000623768 87 ntBASIC3.31□□□□□ -1.88
SNX3O60493 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX3O60493 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX3O60493 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms