Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXN3O00409 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXN3O00409 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXN3O00409 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXN3O00409 AC073614.1-201ENST00000438690 650 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AL031667.1-201ENST00000440222 725 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 MTND6P13-201ENST00000443510 523 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 HMGB3P22-202ENST00000451823 572 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXN3O00409 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXN3O00409 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXN3O00409 AC055855.1-201ENST00000489563 579 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AC020893.1-201ENST00000502452 580 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AC109927.2-201ENST00000506416 303 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXN3O00409 AC109464.2-201ENST00000510242 943 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 RNU6-405P-201ENST00000516637 110 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AP003467.2-201ENST00000520175 319 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AC103783.1-201ENST00000520506 373 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AP003122.4-201ENST00000530980 758 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXN3O00409 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXN3O00409 GNRHR2P1-201ENST00000555315 631 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXN3O00409 AC023575.1-201ENST00000580510 358 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 CKS1BP3-201ENST00000600888 237 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AC068790.5-201ENST00000602741 355 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AC020910.2-201ENST00000603635 610 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AC011468.4-201ENST00000603942 409 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXN3O00409 RNU6-87P-201ENST00000607561 108 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXN3O00409 Z99129.1-201ENST00000612510 255 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AL589743.7-201ENST00000612637 233 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXN3O00409 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXN3O00409 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AL359740.1-201ENST00000624340 592 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 OR52H1-202ENST00000641796 1061 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 AC010300.1-201ENST00000600671 5134 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
FOXN3O00409 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXN3O00409 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXN3O00409 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
FOXN3O00409 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXN3O00409 AL133383.2-201ENST00000622958 2336 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 AC005832.2-201ENST00000538921 1430 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
FOXN3O00409 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.3□□□□□ -1.72
FOXN3O00409 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN3O00409 GNG5P1-201ENST00000255500 204 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 RNU6-1155P-201ENST00000363554 107 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 RNY4P16-201ENST00000364768 94 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 SNORD115.1-201ENST00000391109 76 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 RNU6-516P-201ENST00000411381 104 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 AC016397.1-201ENST00000412463 242 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 BX295541.1-201ENST00000417774 250 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 RPS15AP12-201ENST00000419498 388 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXN3O00409 AL353777.1-201ENST00000425552 326 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXN3O00409 BX890604.2-201ENST00000427883 474 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXN3O00409 AC010618.1-201ENST00000469924 477 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 RPS3AP50-201ENST00000487064 803 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN3O00409 AC004062.1-201ENST00000509926 645 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXN3O00409 AC026801.2-201ENST00000515352 425 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 RNU6-201P-201ENST00000517100 61 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN3O00409 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.3□□□□□ -1.72
FOXN3O00409 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXN3O00409 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.3□□□□□ -1.72
FOXN3O00409 AC025884.1-201ENST00000556034 378 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 AC245505.1-201ENST00000556398 224 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXN3O00409 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.3□□□□□ -1.72
FOXN3O00409 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN3O00409 AP001429.1-201ENST00000602568 530 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 AC128687.2-201ENST00000609657 566 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 MIR6868-201ENST00000611215 58 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 AC090970.3-201ENST00000612566 866 ntBASIC4.3□□□□□ -1.72
FOXN3O00409 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXN3O00409 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.3□□□□□ -1.72
FOXN3O00409 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.3□□□□□ -1.72
FOXN3O00409 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.3□□□□□ -1.72
FOXN3O00409 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN3O00409 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN3O00409 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN3O00409 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXN3O00409 AP001486.2-201ENST00000561652 5113 ntBASIC4.29□□□□□ -1.72
FOXN3O00409 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXN3O00409 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
FOXN3O00409 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FOXN3O00409 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXN3O00409 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
FOXN3O00409 SNORA31-201ENST00000362607 130 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms