Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AL121821.2-201ENST00000556081 394 ntBASIC1.53□□□□□ -2.16
COL6A5A8TX70 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.53□□□□□ -2.16
COL6A5A8TX70 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.53□□□□□ -2.16
COL6A5A8TX70 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.53□□□□□ -2.16
COL6A5A8TX70 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
COL6A5A8TX70 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
COL6A5A8TX70 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.53□□□□□ -2.16
COL6A5A8TX70 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
COL6A5A8TX70 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
COL6A5A8TX70 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.53□□□□□ -2.17
COL6A5A8TX70 RPL23AP39-201ENST00000415533 405 ntBASIC1.53□□□□□ -2.17
COL6A5A8TX70 RPS29P11-201ENST00000496507 171 ntBASIC1.53□□□□□ -2.17
COL6A5A8TX70 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.53□□□□□ -2.17
COL6A5A8TX70 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.53□□□□□ -2.17
COL6A5A8TX70 IGHV3-76-201ENST00000522465 295 ntBASIC1.53□□□□□ -2.17
COL6A5A8TX70 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.53□□□□□ -2.17
COL6A5A8TX70 AC131902.3-201ENST00000611767 581 ntBASIC1.53□□□□□ -2.17
COL6A5A8TX70 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.53□□□□□ -2.17
COL6A5A8TX70 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.52□□□□□ -2.17
COL6A5A8TX70 RNA5SP331-201ENST00000364986 107 ntBASIC1.52□□□□□ -2.17
COL6A5A8TX70 VTRNA1-3-201ENST00000365645 89 ntBASIC1.52□□□□□ -2.17
COL6A5A8TX70 Z98749.2-208ENST00000381646 500 ntBASIC1.52□□□□□ -2.17
COL6A5A8TX70 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.52□□□□□ -2.17
COL6A5A8TX70 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.52□□□□□ -2.17
COL6A5A8TX70 HMGB1P31-201ENST00000437242 427 ntBASIC1.52□□□□□ -2.17
COL6A5A8TX70 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.52□□□□□ -2.17
COL6A5A8TX70 SNRPGP19-201ENST00000603826 189 ntBASIC1.52□□□□□ -2.17
COL6A5A8TX70 AP006248.2-201ENST00000623309 592 ntBASIC1.52□□□□□ -2.17
COL6A5A8TX70 SEPT7P7-201ENST00000420492 1301 ntBASIC1.52□□□□□ -2.17
COL6A5A8TX70 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
COL6A5A8TX70 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.52□□□□□ -2.17
COL6A5A8TX70 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
COL6A5A8TX70 Y_RNA.115-201ENST00000363272 98 ntBASIC1.52□□□□□ -2.17
COL6A5A8TX70 DNAJC19P6-201ENST00000401853 280 ntBASIC1.52□□□□□ -2.17
COL6A5A8TX70 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.52□□□□□ -2.17
COL6A5A8TX70 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.52□□□□□ -2.17
COL6A5A8TX70 YWHAZP7-201ENST00000436906 631 ntBASIC1.52□□□□□ -2.17
COL6A5A8TX70 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.52□□□□□ -2.17
COL6A5A8TX70 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.52□□□□□ -2.17
COL6A5A8TX70 KATNBL1P4-201ENST00000503545 918 ntBASIC1.52□□□□□ -2.17
COL6A5A8TX70 AC090819.1-201ENST00000523800 1111 ntBASIC1.52□□□□□ -2.17
COL6A5A8TX70 FAM92A1P1-201ENST00000528023 890 ntBASIC1.52□□□□□ -2.17
COL6A5A8TX70 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC1.52□□□□□ -2.17
COL6A5A8TX70 AC008133.2-201ENST00000624540 351 ntBASIC1.52□□□□□ -2.17
COL6A5A8TX70 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
COL6A5A8TX70 MTND5P27-201ENST00000428871 1720 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 MAPK10-322ENST00000641485 4530 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 ZNF734P-201ENST00000419494 1534 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 SNORA7.1-201ENST00000363750 139 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 MIR181B1-201ENST00000385240 110 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
COL6A5A8TX70 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.51□□□□□ -2.17
COL6A5A8TX70 ATG3P1-201ENST00000419507 911 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.51□□□□□ -2.17
COL6A5A8TX70 CDC42P1-201ENST00000456658 548 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.51□□□□□ -2.17
COL6A5A8TX70 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.51□□□□□ -2.17
COL6A5A8TX70 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.51□□□□□ -2.17
COL6A5A8TX70 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.51□□□□□ -2.17
COL6A5A8TX70 AC092650.2-201ENST00000619984 902 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 AC244517.12-201ENST00000623581 663 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 AC008264.2-201ENST00000610193 3731 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
COL6A5A8TX70 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC1.51□□□□□ -2.17
COL6A5A8TX70 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
COL6A5A8TX70 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 AL358453.1-201ENST00000422522 250 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.51□□□□□ -2.17
COL6A5A8TX70 PIGFP3-201ENST00000441918 722 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 RPS27AP18-201ENST00000515536 459 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.51□□□□□ -2.17
COL6A5A8TX70 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.51□□□□□ -2.17
COL6A5A8TX70 uc_338.5-201ENST00000611839 155 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 LRRC77P-213ENST00000637727 880 ntBASIC1.51□□□□□ -2.17
COL6A5A8TX70 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.5□□□□□ -2.17
COL6A5A8TX70 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
COL6A5A8TX70 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL6A5A8TX70 RNU2-6P-201ENST00000411404 190 ntBASIC1.5□□□□□ -2.17
COL6A5A8TX70 MED6P1-201ENST00000439659 713 ntBASIC1.5□□□□□ -2.17
COL6A5A8TX70 AC010265.1-201ENST00000513509 211 ntBASIC1.5□□□□□ -2.17
COL6A5A8TX70 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.5□□□□□ -2.17
COL6A5A8TX70 CR383656.8-201ENST00000549046 145 ntBASIC1.5□□□□□ -2.17
COL6A5A8TX70 AL161670.1-201ENST00000554348 137 ntBASIC1.5□□□□□ -2.17
COL6A5A8TX70 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.5□□□□□ -2.17
COL6A5A8TX70 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
COL6A5A8TX70 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.5□□□□□ -2.17
COL6A5A8TX70 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
COL6A5A8TX70 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.5□□□□□ -2.17
COL6A5A8TX70 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL6A5A8TX70 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL6A5A8TX70 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.5□□□□□ -2.17
COL6A5A8TX70 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.5□□□□□ -2.17
COL6A5A8TX70 AC007560.1-201ENST00000426912 237 ntBASIC1.5□□□□□ -2.17
COL6A5A8TX70 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.5□□□□□ -2.17
COL6A5A8TX70 AL445669.2-201ENST00000454425 421 ntBASIC1.5□□□□□ -2.17
COL6A5A8TX70 AL049830.2-201ENST00000480072 201 ntBASIC1.5□□□□□ -2.17
COL6A5A8TX70 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.5□□□□□ -2.17
COL6A5A8TX70 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.5□□□□□ -2.17
COL6A5A8TX70 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms