Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC007098.1-201ENST00000420122 367 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AC092017.2-201ENST00000427600 362 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AL445646.1-201ENST00000431784 216 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AL031183.1-201ENST00000457667 207 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 HMGB1P47-201ENST00000511281 589 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 RNA5SP356-201ENST00000515972 94 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AC074029.1-201ENST00000552531 1044 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AC234778.2-201ENST00000566241 354 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 OR4K8P-201ENST00000578842 1048 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AC107214.2-201ENST00000608204 634 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 AC135507.2-201ENST00000612443 309 ntBASIC1.27□□□□□ -2.21
LINC01549A6NIU2 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.27□□□□□ -2.21
LINC01549A6NIU2 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 RNF6P1-201ENST00000444889 1784 ntBASIC1.26□□□□□ -2.21
LINC01549A6NIU2 RNU6-997P-201ENST00000384725 107 ntBASIC1.26□□□□□ -2.21
LINC01549A6NIU2 RNA5SP105-201ENST00000391123 113 ntBASIC1.26□□□□□ -2.21
LINC01549A6NIU2 RPS4XP8-201ENST00000402039 771 ntBASIC1.26□□□□□ -2.21
LINC01549A6NIU2 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AC092155.2-201ENST00000454675 477 ntBASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 FAM133DP-201ENST00000464802 691 ntBASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AC010285.1-201ENST00000470580 392 ntBASIC1.26□□□□□ -2.21
LINC01549A6NIU2 HSPE1P18-201ENST00000517602 280 ntBASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 GLUD1P4-201ENST00000590914 418 ntBASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AC103710.1-201ENST00000610003 901 ntBASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AP001486.3-201ENST00000615334 372 ntBASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AC025016.1-201ENST00000616746 682 ntBASIC1.26□□□□□ -2.21
LINC01549A6NIU2 MIR6810-201ENST00000622701 70 ntBASIC1.26□□□□□ -2.21
LINC01549A6NIU2 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AC009812.4-201ENST00000569134 1805 ntBASIC1.26□□□□□ -2.21
LINC01549A6NIU2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.26□□□□□ -2.21
LINC01549A6NIU2 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
LINC01549A6NIU2 SNORD48-201ENST00000364953 64 ntBASIC1.25□□□□□ -2.21
LINC01549A6NIU2 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.25□□□□□ -2.21
LINC01549A6NIU2 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
LINC01549A6NIU2 RPL7P27-201ENST00000403775 720 ntBASIC1.25□□□□□ -2.21
LINC01549A6NIU2 RPL23AP33-201ENST00000442301 452 ntBASIC1.25□□□□□ -2.21
LINC01549A6NIU2 AL035407.2-201ENST00000454090 378 ntBASIC1.25□□□□□ -2.21
LINC01549A6NIU2 RNU7-26P-201ENST00000458980 63 ntBASIC1.25□□□□□ -2.21
LINC01549A6NIU2 AC010301.1-201ENST00000473936 355 ntBASIC1.25□□□□□ -2.21
LINC01549A6NIU2 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01549A6NIU2 MTAPP1-201ENST00000489154 819 ntBASIC1.25□□□□□ -2.21
LINC01549A6NIU2 AC020699.1-201ENST00000505161 445 ntBASIC1.25□□□□□ -2.21
LINC01549A6NIU2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
LINC01549A6NIU2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LINC01549A6NIU2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.25□□□□□ -2.21
LINC01549A6NIU2 AC022634.1-201ENST00000520765 532 ntBASIC1.25□□□□□ -2.21
LINC01549A6NIU2 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.25□□□□□ -2.21
LINC01549A6NIU2 AP005597.4-201ENST00000526762 229 ntBASIC1.25□□□□□ -2.21
LINC01549A6NIU2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01549A6NIU2 AL590282.1-201ENST00000610379 1136 ntBASIC1.25□□□□□ -2.21
LINC01549A6NIU2 AL627230.6-201ENST00000611129 280 ntBASIC1.25□□□□□ -2.21
LINC01549A6NIU2 AC096577.2-201ENST00000611455 153 ntBASIC1.25□□□□□ -2.21
LINC01549A6NIU2 Y_RNA.783-201ENST00000613546 102 ntBASIC1.25□□□□□ -2.21
LINC01549A6NIU2 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC01549A6NIU2 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
LINC01549A6NIU2 CYCSP45-201ENST00000402289 315 ntBASIC1.24□□□□□ -2.21
LINC01549A6NIU2 RNU2-20P-201ENST00000410425 191 ntBASIC1.24□□□□□ -2.21
LINC01549A6NIU2 RNU4-53P-201ENST00000410828 140 ntBASIC1.24□□□□□ -2.21
LINC01549A6NIU2 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC01549A6NIU2 CKS1BP5-201ENST00000434172 273 ntBASIC1.24□□□□□ -2.21
LINC01549A6NIU2 AL445687.1-201ENST00000439946 251 ntBASIC1.24□□□□□ -2.21
LINC01549A6NIU2 COX6CP12-201ENST00000446748 202 ntBASIC1.24□□□□□ -2.21
LINC01549A6NIU2 Z99714.1-201ENST00000450463 807 ntBASIC1.24□□□□□ -2.21
LINC01549A6NIU2 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.24□□□□□ -2.21
LINC01549A6NIU2 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.24□□□□□ -2.21
LINC01549A6NIU2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.24□□□□□ -2.21
LINC01549A6NIU2 OR5BM1P-201ENST00000512021 366 ntBASIC1.24□□□□□ -2.21
LINC01549A6NIU2 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC01549A6NIU2 AC022880.1-201ENST00000534017 973 ntBASIC1.24□□□□□ -2.21
LINC01549A6NIU2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC01549A6NIU2 TRAV28-201ENST00000557548 323 ntBASIC1.24□□□□□ -2.21
LINC01549A6NIU2 AC124283.4-201ENST00000581815 456 ntBASIC1.24□□□□□ -2.21
LINC01549A6NIU2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms