Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MRPL50P4-201ENST00000446432 475 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 USP9YP34-201ENST00000453983 808 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AC027673.1-201ENST00000456245 405 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AC104164.3-201ENST00000467363 1258 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AC013828.1-201ENST00000481845 158 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 DSTNP2-201ENST00000504533 515 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 RAC1P5-201ENST00000512182 576 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 RNU5A-7P-201ENST00000515979 116 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 HMGB1P41-201ENST00000520234 440 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AL133271.1-201ENST00000538229 291 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 CR383656.7-201ENST00000548164 174 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AL355836.1-201ENST00000555951 870 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 HMGB1P14-201ENST00000557424 591 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 LARP7P2-201ENST00000575306 125 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 MIR5186-201ENST00000577504 120 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AC015688.2-201ENST00000584523 262 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AC092954.1-201ENST00000609121 445 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AP005137.2-201ENST00000609238 400 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AC100793.4-201ENST00000613683 429 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AL355365.1-201ENST00000616480 294 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AL355493.4-201ENST00000618530 292 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 AC002064.3-201ENST00000623448 346 ntBASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.29□□□□□ -2.04
RBFOX3A6NFN3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 ZNF519P1-201ENST00000449011 1626 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 HMGB1P5-201ENST00000255320 642 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AC073325.2-201ENST00000339545 159 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 SNORA63.1-201ENST00000362493 131 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 DEFA7P-201ENST00000382676 285 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 RNU6-354P-201ENST00000383862 107 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 RNU6-610P-201ENST00000384264 107 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 SNORD67-201ENST00000390833 111 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 U3.19-201ENST00000390893 196 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 TAF9BP1-201ENST00000396646 746 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 FO393413.1-201ENST00000402892 195 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 MIR1290-201ENST00000408735 78 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AC063979.1-201ENST00000415539 377 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AL353678.1-201ENST00000422735 741 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 RPF2P1-201ENST00000424137 906 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AC006946.1-201ENST00000429106 328 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AC024082.2-201ENST00000434771 238 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AC000041.1-201ENST00000439655 175 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 PRDX3P3-201ENST00000447765 522 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 RPL30P5-201ENST00000494923 336 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 PRELID3BP6-201ENST00000503839 571 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AL359273.1-201ENST00000510918 627 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 OR8K2P-201ENST00000524645 927 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 CASP1P1-201ENST00000526345 212 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 MIR3605-201ENST00000583214 100 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 BNIP3P24-201ENST00000593398 557 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AC010620.2-201ENST00000600135 313 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AP000238.1-201ENST00000608759 426 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AC009464.1-201ENST00000615731 469 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AC093875.1-201ENST00000623688 504 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AC010297.1-201ENST00000623948 149 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AC110079.1-202ENST00000635213 138 ntBASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RBFOX3A6NFN3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
RBFOX3A6NFN3 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.28□□□□□ -2.05
RBFOX3A6NFN3 MTND5P1-201ENST00000445440 1375 ntBASIC2.27□□□□□ -2.05
RBFOX3A6NFN3 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.27□□□□□ -2.05
RBFOX3A6NFN3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RBFOX3A6NFN3 RNU6-492P-201ENST00000363035 104 ntBASIC2.27□□□□□ -2.05
RBFOX3A6NFN3 RNU6-1066P-201ENST00000363573 105 ntBASIC2.27□□□□□ -2.05
RBFOX3A6NFN3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RBFOX3A6NFN3 MIR135A2-201ENST00000384854 100 ntBASIC2.27□□□□□ -2.05
RBFOX3A6NFN3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RBFOX3A6NFN3 RPL22P22-201ENST00000395439 379 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms