Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 AP003122.3-201ENST00000526316 255 ntBASIC6.04□□□□□ -1.44
USP17L3A6NCW0 MIR3941-201ENST00000582572 103 ntBASIC6.04□□□□□ -1.44
USP17L3A6NCW0 MIR4512-201ENST00000583257 77 ntBASIC6.04□□□□□ -1.44
USP17L3A6NCW0 7SK.7-201ENST00000603504 247 ntBASIC6.04□□□□□ -1.44
USP17L3A6NCW0 AL670379.4-201ENST00000605279 254 ntBASIC6.04□□□□□ -1.44
USP17L3A6NCW0 AC009570.1-201ENST00000609599 745 ntBASIC6.04□□□□□ -1.44
USP17L3A6NCW0 TUG1_2.1-201ENST00000614234 87 ntBASIC6.04□□□□□ -1.44
USP17L3A6NCW0 AL355365.1-201ENST00000616480 294 ntBASIC6.04□□□□□ -1.44
USP17L3A6NCW0 AC022418.1-201ENST00000624118 445 ntBASIC6.04□□□□□ -1.44
USP17L3A6NCW0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.04□□□□□ -1.44
USP17L3A6NCW0 AP002512.4-202ENST00000641599 4530 ntBASIC6.04□□□□□ -1.44
USP17L3A6NCW0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
USP17L3A6NCW0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USP17L3A6NCW0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.04□□□□□ -1.44
USP17L3A6NCW0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 KPNA2P1-201ENST00000458289 1591 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 RNU6-1115P-201ENST00000362490 106 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 RNU6-562P-201ENST00000362731 107 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 Y_RNA.158-201ENST00000363651 101 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 SMIM11P1-201ENST00000369586 178 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 AC019155.1-201ENST00000382242 574 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 Y_RNA.493-201ENST00000384422 102 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 AL391219.1-201ENST00000422570 483 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 NRBF2P3-201ENST00000432731 865 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 NPM1P18-201ENST00000434232 732 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 RPL23AP56-201ENST00000460778 453 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 AC012339.2-201ENST00000523996 453 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 AP003385.6-201ENST00000531603 374 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 AC090115.3-201ENST00000553218 849 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 TVP23CP2-201ENST00000571473 623 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 RN7SL290P-201ENST00000578661 300 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 MIR4680-201ENST00000580906 66 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 ATP1B3P1-201ENST00000605365 821 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 AC110801.1-201ENST00000623590 212 ntBASIC6.03□□□□□ -1.44
USP17L3A6NCW0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP17L3A6NCW0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.02□□□□□ -1.44
USP17L3A6NCW0 AL451142.2-201ENST00000429076 2090 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 OR1L6-202ENST00000373684 1044 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 RNU6-331P-201ENST00000384724 107 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 RNA5SP241-201ENST00000391326 114 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 Y_RNA.646-201ENST00000410980 101 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 BX510359.2-201ENST00000417920 305 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 RPL18P10-201ENST00000425606 538 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 LAMTOR3P1-201ENST00000428620 370 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 AC108059.2-201ENST00000434626 151 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 RPL7P28-201ENST00000437739 740 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 AC005154.2-201ENST00000438110 379 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 FABP5P13-201ENST00000452144 328 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 HMGB1P25-201ENST00000468402 607 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 AP002812.1-201ENST00000495378 474 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 AC098976.1-201ENST00000513014 541 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 RNU6-1137P-201ENST00000517073 99 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 RN7SKP92-201ENST00000517266 244 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 MIR4420-201ENST00000583944 77 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 MIR3149-201ENST00000584629 83 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.02□□□□□ -1.45
USP17L3A6NCW0 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
USP17L3A6NCW0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP17L3A6NCW0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
USP17L3A6NCW0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP17L3A6NCW0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP17L3A6NCW0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP17L3A6NCW0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
USP17L3A6NCW0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP17L3A6NCW0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.01□□□□□ -1.45
USP17L3A6NCW0 RNU6-989P-201ENST00000362756 107 ntBASIC6.01□□□□□ -1.45
USP17L3A6NCW0 SNORD3E-201ENST00000362899 217 ntBASIC6.01□□□□□ -1.45
USP17L3A6NCW0 Y_RNA.399-201ENST00000383955 105 ntBASIC6.01□□□□□ -1.45
USP17L3A6NCW0 RNU6-128P-201ENST00000383976 107 ntBASIC6.01□□□□□ -1.45
USP17L3A6NCW0 SNORA70.10-201ENST00000384515 134 ntBASIC6.01□□□□□ -1.45
USP17L3A6NCW0 SNORD70.1-201ENST00000391007 85 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms