Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AL121871.1-201ENST00000443413 436 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 MTND3P6-201ENST00000485242 339 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 RPS27P21-201ENST00000486977 252 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 AC034222.1-201ENST00000494052 532 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 AC090453.1-201ENST00000495560 436 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 AC009901.1-201ENST00000506703 541 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 CDC42P4-201ENST00000510507 563 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 AC114781.4-201ENST00000513707 639 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 HIGD1AP3-201ENST00000515857 278 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 RNU2-44P-201ENST00000516795 194 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 MIR3162-201ENST00000581818 82 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 MIR92B-201ENST00000607575 96 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 AC012150.2-201ENST00000621300 544 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 FAM157B-203ENST00000639350 358 ntBASIC1.59□□□□□ -2.15
TRAV1-2A0A0B4J238 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
TRAV1-2A0A0B4J238 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 SET-203ENST00000372688 801 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 SNORA64-201ENST00000384674 134 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 RN7SKP32-201ENST00000410167 303 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AL513331.1-201ENST00000411908 397 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AC092447.6-201ENST00000414578 210 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 UBE2V1P6-201ENST00000430840 422 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 RPL23AP83-201ENST00000434984 473 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 RPS7P2-201ENST00000435134 607 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 IPO7P1-201ENST00000442031 636 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 BX276092.4-201ENST00000452056 248 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 NPM1P13-201ENST00000452663 865 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 snoU13.24-201ENST00000458998 104 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 SETP6-201ENST00000479329 568 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AC007182.2-201ENST00000489251 402 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 RPS29P20-201ENST00000489592 171 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 OR5H5P-201ENST00000503164 928 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 PCNAP1-202ENST00000595299 752 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AC005000.2-201ENST00000605468 310 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AL513477.2-201ENST00000607858 568 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AL133370.2-201ENST00000619934 439 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AL158801.5-201ENST00000623123 465 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AC020923.1-201ENST00000624021 917 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AC138915.1-201ENST00000565427 1685 ntBASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV1-2A0A0B4J238 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 AC092881.1-201ENST00000638218 2733 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 MIR208A-201ENST00000362287 71 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 RNU6-799P-201ENST00000363567 107 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 SNORA67.3-201ENST00000384366 140 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 RPS15AP40-201ENST00000419621 391 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 UBE2D3P2-201ENST00000424409 445 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 UBE2FP3-201ENST00000436366 524 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 ELOCP13-201ENST00000443934 329 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 AC096992.1-201ENST00000459808 709 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 RPL21P99-201ENST00000480369 423 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 RPL23AP41-201ENST00000484754 458 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 HMGB1P47-201ENST00000511281 589 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 OSBPL9P3-201ENST00000534523 595 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 MTCO1P40-201ENST00000574371 625 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 AC017100.2-201ENST00000584628 355 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 AL390838.2-201ENST00000602394 274 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 RPP40P2-201ENST00000603596 712 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 AL133507.1-201ENST00000605269 557 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 AC106028.5-201ENST00000610332 395 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 MIR203B-201ENST00000636080 86 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 AL359715.4-201ENST00000606629 1436 ntBASIC1.57□□□□□ -2.16
TRAV1-2A0A0B4J238 ZNF734P-201ENST00000419494 1534 ntBASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 RNU6-1251P-201ENST00000364502 107 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms