Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 MIR4293-201ENST00000584305 78 ntBASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AC011447.4-201ENST00000587562 111 ntBASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 SNORD3E-201ENST00000362899 217 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 RNU6-1287P-201ENST00000362914 107 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 RNU6-379P-201ENST00000363813 104 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 Y_RNA.455-201ENST00000384230 98 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 RNU6-1060P-201ENST00000384664 107 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 RNU6-550P-201ENST00000391057 101 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 RNU2-47P-201ENST00000410649 186 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC069213.2-201ENST00000420238 366 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC093151.1-201ENST00000427711 313 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AL669831.1-202ENST00000428504 417 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 RPS29P9-201ENST00000440360 171 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 RPS15AP27-201ENST00000449183 343 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 IGHV5-78-201ENST00000450948 295 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 GSTA11P-201ENST00000452866 669 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 RPL5P30-201ENST00000465511 891 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC005532.2-201ENST00000467154 373 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 BX284632.1-201ENST00000478218 541 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC015911.1-201ENST00000495111 156 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 RPL30P11-201ENST00000495304 339 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC006499.3-201ENST00000506077 748 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC104806.1-201ENST00000508720 308 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC009812.2-201ENST00000517657 457 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC012339.2-201ENST00000523996 453 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AL133271.1-201ENST00000538229 291 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 SULT1C2P2-201ENST00000562517 294 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC113195.1-201ENST00000579952 141 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 RN7SL753P-201ENST00000581238 290 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AL109918.3-201ENST00000603072 338 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC105254.2-201ENST00000603636 436 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC012443.1-201ENST00000605605 231 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC011890.2-201ENST00000613393 294 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC010378.1-201ENST00000619270 362 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 BX005214.3-202ENST00000619809 325 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC011978.2-201ENST00000569835 2054 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC008079.2-201ENST00000623543 20396 ntBASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
AP4E1Q9UPM8 AC103710.2-202ENST00000641454 2853 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 RNU1-130P-201ENST00000363930 160 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 RNU1-106P-201ENST00000384382 164 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 SNORA70.10-201ENST00000384515 134 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 RNU6-1127P-201ENST00000384580 107 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 SNORA66-201ENST00000384792 133 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AL049697.2-201ENST00000403708 294 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AL391417.1-201ENST00000404100 426 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 RNU2-15P-201ENST00000410692 191 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AC007738.1-201ENST00000413892 348 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 GJA6P-201ENST00000415117 1042 ntBASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.22□□□□□ -1.57
AP4E1Q9UPM8 AC104333.2-201ENST00000422630 192 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms