Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 CD24P2-201ENST00000565486 219 ntBASIC2.53□□□□□ -2
PHRF1Q9P1Y6 AC103810.1-201ENST00000579873 453 ntBASIC2.53□□□□□ -2
PHRF1Q9P1Y6 AL135786.2-201ENST00000608422 615 ntBASIC2.53□□□□□ -2
PHRF1Q9P1Y6 AL159169.2-201ENST00000610061 1269 ntBASIC2.53□□□□□ -2
PHRF1Q9P1Y6 C2orf27A-204ENST00000623058 969 ntBASIC2.53□□□□□ -2
PHRF1Q9P1Y6 AC000123.2-201ENST00000623124 461 ntBASIC2.53□□□□□ -2
PHRF1Q9P1Y6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.53□□□□□ -2
PHRF1Q9P1Y6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PHRF1Q9P1Y6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
PHRF1Q9P1Y6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.53□□□□□ -2
PHRF1Q9P1Y6 SEC63P1-201ENST00000425785 1258 ntBASIC2.53□□□□□ -2
PHRF1Q9P1Y6 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.53□□□□□ -2
PHRF1Q9P1Y6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.53□□□□□ -2
PHRF1Q9P1Y6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.53□□□□□ -2
PHRF1Q9P1Y6 MIR5089-201ENST00000580047 84 ntBASIC2.53□□□□□ -2
PHRF1Q9P1Y6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.53□□□□□ -2
PHRF1Q9P1Y6 AC009314.1-201ENST00000603871 304 ntBASIC2.53□□□□□ -2
PHRF1Q9P1Y6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.53□□□□□ -2
PHRF1Q9P1Y6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2.01
PHRF1Q9P1Y6 AL109809.4-201ENST00000603520 2185 ntBASIC2.53□□□□□ -2.01
PHRF1Q9P1Y6 AL592437.2-201ENST00000421655 2434 ntBASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 AL021407.1-201ENST00000404531 386 ntBASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 NEK4P1-201ENST00000433383 879 ntBASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 AL157827.1-201ENST00000447622 132 ntBASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 AC140059.1-201ENST00000489238 361 ntBASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 GTF2IP9-201ENST00000502460 301 ntBASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 RN7SKP34-201ENST00000516142 244 ntBASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 RNU6-250P-201ENST00000516958 103 ntBASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PHRF1Q9P1Y6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.51□□□□□ -2.01
PHRF1Q9P1Y6 SET-203ENST00000372688 801 ntTSL 2 BASIC2.51□□□□□ -2.01
PHRF1Q9P1Y6 AL589994.1-201ENST00000404962 340 ntBASIC2.51□□□□□ -2.01
PHRF1Q9P1Y6 HMGB1P13-201ENST00000406019 642 ntBASIC2.51□□□□□ -2.01
PHRF1Q9P1Y6 SNORA81-201ENST00000408493 178 ntBASIC2.51□□□□□ -2.01
PHRF1Q9P1Y6 MIR1294-201ENST00000408503 142 ntBASIC2.51□□□□□ -2.01
PHRF1Q9P1Y6 AL513331.1-201ENST00000411908 397 ntBASIC2.51□□□□□ -2.01
PHRF1Q9P1Y6 RPL7P46-201ENST00000425129 740 ntBASIC2.51□□□□□ -2.01
PHRF1Q9P1Y6 NDUFA5P4-201ENST00000436704 385 ntBASIC2.51□□□□□ -2.01
PHRF1Q9P1Y6 AC090071.1-201ENST00000507713 644 ntBASIC2.51□□□□□ -2.01
PHRF1Q9P1Y6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.51□□□□□ -2.01
PHRF1Q9P1Y6 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.51□□□□□ -2.01
PHRF1Q9P1Y6 AL356280.1-201ENST00000603614 379 ntBASIC2.51□□□□□ -2.01
PHRF1Q9P1Y6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 HMGB1P31-201ENST00000437242 427 ntBASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 Z73417.1-201ENST00000447373 778 ntBASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 IFNWP4-201ENST00000453148 294 ntBASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 HSPE1P22-201ENST00000456856 327 ntBASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 RNA5SP490-201ENST00000517141 136 ntBASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 AC012321.1-201ENST00000561622 1588 ntBASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 Y_RNA.122-201ENST00000363331 96 ntBASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 FNDC3CP-201ENST00000420795 1155 ntBASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 AC026241.1-201ENST00000517873 2142 ntBASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 SUB1P3-201ENST00000564581 315 ntBASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 VIS1.1-201ENST00000610517 203 ntBASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 AC034102.8-201ENST00000615146 484 ntBASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PHRF1Q9P1Y6 AC027514.1-201ENST00000588561 1603 ntBASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 CUL4AP1-201ENST00000514750 1863 ntBASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 AC011155.1-201ENST00000316512 456 ntBASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 AC019129.1-201ENST00000403786 261 ntBASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 RNA5SP338-201ENST00000410495 85 ntBASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 AC109583.1-201ENST00000432156 268 ntBASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 RPS7P5-201ENST00000441482 581 ntBASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 TRIM60P18-201ENST00000441518 828 ntBASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 AL163540.1-201ENST00000485382 386 ntBASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 AC107393.1-201ENST00000512403 346 ntBASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 SNORA25.15-201ENST00000516487 89 ntBASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 HMGN1P28-201ENST00000521340 364 ntBASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.49□□□□□ -2.01
PHRF1Q9P1Y6 AC105036.1-201ENST00000566222 271 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms