Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
EHD3Q9NZN3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
EHD3Q9NZN3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.18□□□□□ -1.74
EHD3Q9NZN3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 MTND4P29-201ENST00000503122 1372 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 RNU1-130P-201ENST00000363930 160 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 SNORA20.2-201ENST00000383922 131 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 RNU6-456P-201ENST00000384493 107 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AL356776.1-201ENST00000406574 447 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 RN7SKP235-201ENST00000410662 305 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AC006548.1-201ENST00000427470 102 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 RPL7P28-201ENST00000437739 740 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 RPL7P54-201ENST00000438336 674 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AL136380.1-201ENST00000447970 162 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AL451050.1-201ENST00000450126 415 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AC092001.1-201ENST00000453012 261 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 RAD23BP3-201ENST00000454157 1152 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 snoU13.8-201ENST00000458890 104 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 RPS27AP17-201ENST00000463344 455 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AC022034.3-201ENST00000471393 478 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 RNU6-875P-201ENST00000516488 106 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AC022790.1-201ENST00000522872 204 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AC090615.1-201ENST00000577519 154 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 FGF7P1-201ENST00000582820 288 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 YWHAQP7-201ENST00000603536 658 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AC007621.1-201ENST00000604544 437 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AC115621.1-201ENST00000604653 858 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AL035413.2-201ENST00000604801 525 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AL160290.3-201ENST00000604869 165 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AL136363.1-201ENST00000605349 337 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 AP001330.5-201ENST00000607176 411 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 CR381572.1-201ENST00000625098 102 ntBASIC4.17□□□□□ -1.74
EHD3Q9NZN3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
EHD3Q9NZN3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 CBX3P1-201ENST00000325243 554 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC067945.1-201ENST00000342609 618 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 RNA5SP258-201ENST00000362750 119 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 RNU6-97P-201ENST00000363387 104 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 MIR129-1-201ENST00000384972 72 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AL049693.1-201ENST00000402760 611 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 RNU2-41P-201ENST00000410991 178 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 RNA5SP39-201ENST00000411245 120 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 MTATP6P18-201ENST00000417994 673 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC119618.1-201ENST00000434191 222 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 RPS20P21-201ENST00000466859 343 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC055855.1-201ENST00000489563 579 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 MTCYBP18-201ENST00000501056 747 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AK3P4-201ENST00000504283 583 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC018710.1-201ENST00000506509 158 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 IFITM8P-201ENST00000522529 394 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC022616.3-201ENST00000523940 148 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC104383.1-201ENST00000530297 370 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC060771.1-201ENST00000582031 164 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC011477.5-201ENST00000586571 259 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC234771.5-201ENST00000600161 514 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AL353621.2-201ENST00000605340 133 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AL596245.1-201ENST00000618994 362 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AL356585.4-201ENST00000623078 1229 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 AC099654.5-201ENST00000636479 350 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms