Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 AL138713.1-201ENST00000624026 2130 ntBASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHMP1AQ9HD42 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CHMP1AQ9HD42 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CHMP1AQ9HD42 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CHMP1AQ9HD42 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHMP1AQ9HD42 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 SNORD116-9-201ENST00000384000 95 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 RNU6-398P-201ENST00000384143 109 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 SNORD116-3-201ENST00000384287 95 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 SNORD116-7-201ENST00000384404 95 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 SNORD116-5-201ENST00000384462 95 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 SNORD115.1-201ENST00000391109 76 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AL590139.1-201ENST00000416267 400 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 YPEL5P1-201ENST00000419731 367 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 OR5BE1P-201ENST00000425977 939 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AL356583.2-201ENST00000426536 280 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 CYCSP43-201ENST00000438233 310 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AC092641.1-201ENST00000440229 772 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 TAF9P1-201ENST00000445421 515 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 TAF9P2-201ENST00000454958 515 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 SNRPGP9-201ENST00000456025 225 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 RPL38P1-201ENST00000460914 211 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 RN7SL738P-201ENST00000470264 297 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 RN7SL691P-201ENST00000494487 301 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 FABP5P5-201ENST00000515537 406 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 RNA5SP468-201ENST00000516782 93 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 RNU6-201P-201ENST00000517100 61 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AP000907.2-201ENST00000530827 353 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AC123904.2-201ENST00000548059 300 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AC108747.1-201ENST00000609508 535 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AC019193.2-201ENST00000610012 634 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AC138749.5-201ENST00000611461 208 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 MIR8058-201ENST00000615737 89 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AC116165.2-201ENST00000616705 206 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AC092140.2-201ENST00000618027 521 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AC009159.1-201ENST00000618386 642 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AL603758.1-201ENST00000618654 241 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AL159972.1-201ENST00000625150 448 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AC019226.1-201ENST00000625666 515 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AC025048.6-202ENST00000627667 438 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 OR5BE1P-202ENST00000641168 1176 ntBASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CHMP1AQ9HD42 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 UBE3AP2-201ENST00000429033 2259 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 RNU6-50P-201ENST00000362356 103 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 Y_RNA.608-201ENST00000410647 95 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 RPL23AP38-201ENST00000423801 469 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AL358472.1-201ENST00000431295 329 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 MTND1P28-201ENST00000435623 950 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 COX6CP2-201ENST00000444980 225 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 HMGB3P8-201ENST00000449709 577 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AC009961.3-201ENST00000449832 765 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AC004801.2-202ENST00000463559 283 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AC112204.1-201ENST00000502591 103 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 VN1R104P-201ENST00000505115 1009 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AC004069.2-201ENST00000505438 1114 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AC093840.1-201ENST00000511599 336 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AC105914.1-201ENST00000511798 226 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AL133153.1-201ENST00000557756 303 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AC051619.2-201ENST00000559063 397 ntBASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.39□□□□□ -1.87
CHMP1AQ9HD42 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms