Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 USP9YP8-201ENST00000441913 500 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 Y_RNA.638-201ENST00000459374 113 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 SYPL1P1-201ENST00000473622 768 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 RPS4XP6-201ENST00000477670 797 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 RNU6-1004P-201ENST00000516584 111 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AC025857.1-201ENST00000525252 377 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 HMGB1P51-201ENST00000605166 638 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AC241585.2-209ENST00000638217 143 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AL049737.1-201ENST00000413920 1403 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 RNU1-91P-201ENST00000364746 163 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 RAD23BP2-201ENST00000416003 1207 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 RPL21P66-201ENST00000426566 466 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 SNRPEP4-201ENST00000435815 279 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AC096638.1-201ENST00000444678 216 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 RNU6-711P-201ENST00000517255 106 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AL049870.4-201ENST00000555741 486 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AC025754.2-201ENST00000606491 432 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AC004696.1-201ENST00000614345 607 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 MIR6076-201ENST00000617521 113 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AL356266.1-201ENST00000623311 483 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AC244517.12-201ENST00000623581 663 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 ZNF271P-202ENST00000465539 1970 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 AP002907.1-201ENST00000606361 1430 ntBASIC1.99□□□□□ -2.09
KIAA1549Q9HCM3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 HMGB1P48-201ENST00000446155 598 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 RNA5SP82-201ENST00000516707 92 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC008562.1-201ENST00000521763 330 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC022690.1-201ENST00000526681 550 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 SNORD84-203ENST00000584275 78 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AP001521.1-201ENST00000609150 300 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AP003122.6-201ENST00000623831 495 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 RNU6-386P-201ENST00000362650 107 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 SNORD56.5-201ENST00000364281 72 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 SNORA48.3-201ENST00000391081 134 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AL121972.1-201ENST00000402023 252 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC096533.1-201ENST00000411645 353 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC004022.2-201ENST00000413824 193 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 RFESDP1-201ENST00000422350 461 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC010881.1-201ENST00000433830 235 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC104058.1-201ENST00000448028 297 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 HMGN2P16-201ENST00000456802 261 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC010301.1-201ENST00000473936 355 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 UBL5P3-201ENST00000475112 231 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC104090.1-201ENST00000506341 1171 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 HSPE1P20-201ENST00000538133 289 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC009318.2-201ENST00000610917 651 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC092650.2-201ENST00000619984 902 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 AC020923.1-201ENST00000624021 917 ntBASIC1.98□□□□□ -2.09
KIAA1549Q9HCM3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 RNU6-1181P-201ENST00000384191 106 ntBASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 RNU6-31P-201ENST00000384388 108 ntBASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 RNU6-185P-201ENST00000384421 107 ntBASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 AC107081.1-201ENST00000414975 361 ntBASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 PTP4A1P7-201ENST00000423476 514 ntBASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 RPL30P9-201ENST00000465586 330 ntBASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 SNORD59.2-201ENST00000516873 68 ntBASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 AC019227.1-201ENST00000526902 510 ntBASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 POLR2KP1-201ENST00000553226 168 ntBASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.97□□□□□ -2.09
KIAA1549Q9HCM3 AC103710.2-201ENST00000609912 942 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms