Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 MIR3176-201ENST00000582210 90 ntBASIC5.38□□□□□ -1.55
CBX8Q9HC52 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.38□□□□□ -1.55
CBX8Q9HC52 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.38□□□□□ -1.55
CBX8Q9HC52 AL390240.1-201ENST00000612950 384 ntBASIC5.38□□□□□ -1.55
CBX8Q9HC52 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CBX8Q9HC52 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.38□□□□□ -1.55
CBX8Q9HC52 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CBX8Q9HC52 AC083843.2-201ENST00000568248 6253 ntBASIC5.38□□□□□ -1.55
CBX8Q9HC52 EOGT-210ENST00000615922 1931 ntBASIC5.38□□□□□ -1.55
CBX8Q9HC52 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CBX8Q9HC52 AC009951.1-201ENST00000623674 2614 ntBASIC5.38□□□□□ -1.55
CBX8Q9HC52 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CBX8Q9HC52 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CBX8Q9HC52 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CBX8Q9HC52 BDP1P-201ENST00000582658 1990 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 Y_RNA.31-201ENST00000362574 102 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 SNORA17.1-201ENST00000362945 126 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 RN7SKP115-201ENST00000363177 317 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 RNU6-179P-201ENST00000363350 107 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 RN7SKP160-201ENST00000363804 340 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 UBE2V1P2-201ENST00000397758 440 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 MTCYBP4-201ENST00000401524 249 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 RN7SKP126-201ENST00000411143 300 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 PMCHL1-202ENST00000423102 261 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 Z74021.1-201ENST00000423610 407 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 RPL23AP38-201ENST00000423801 469 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 AL451139.1-201ENST00000434718 346 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 RPL36AP6-201ENST00000435770 321 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 H2AFZP6-201ENST00000444403 394 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 Z95327.1-201ENST00000446082 482 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 RPS17P13-201ENST00000448974 407 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 RN7SL515P-201ENST00000463999 297 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 RNU6-64P-201ENST00000517119 105 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 FAM60DP-201ENST00000524174 632 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 DNAJC8P1-201ENST00000554535 372 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 AL355836.1-201ENST00000555951 870 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 MIR4293-201ENST00000584305 78 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 AC019193.3-201ENST00000609144 554 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 AL158196.1-201ENST00000616786 434 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 MIR6837-201ENST00000620884 64 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 AC091925.2-201ENST00000625059 256 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CBX8Q9HC52 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CBX8Q9HC52 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CBX8Q9HC52 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CBX8Q9HC52 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CBX8Q9HC52 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.37□□□□□ -1.55
CBX8Q9HC52 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CBX8Q9HC52 AL442639.1-201ENST00000625030 1899 ntBASIC5.37□□□□□ -1.55
CBX8Q9HC52 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CBX8Q9HC52 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CBX8Q9HC52 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.36□□□□□ -1.55
CBX8Q9HC52 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CBX8Q9HC52 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CBX8Q9HC52 Y_RNA.133-201ENST00000363428 110 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 Y_RNA.187-201ENST00000363918 113 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 SNORD115-7-201ENST00000365306 82 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 Y_RNA.459-201ENST00000384251 102 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 RNA5SP372-201ENST00000390836 115 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 ENSAP1-201ENST00000392855 326 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.36□□□□□ -1.55
CBX8Q9HC52 AC074085.1-201ENST00000413598 418 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 AC009237.10-201ENST00000414112 510 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 AF186996.5-201ENST00000418098 904 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 AC068533.1-201ENST00000418542 415 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.36□□□□□ -1.55
CBX8Q9HC52 AL590609.2-201ENST00000421430 368 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.36□□□□□ -1.55
CBX8Q9HC52 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.36□□□□□ -1.55
CBX8Q9HC52 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.36□□□□□ -1.55
CBX8Q9HC52 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.36□□□□□ -1.55
CBX8Q9HC52 AC107399.1-201ENST00000451226 265 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 RPS20P21-201ENST00000466859 343 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 RN7SL97P-201ENST00000486780 299 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.36□□□□□ -1.55
CBX8Q9HC52 AC021146.2-201ENST00000504736 556 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 MTCO3P44-201ENST00000510977 541 ntBASIC5.36□□□□□ -1.55
CBX8Q9HC52 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms