Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 RNU6-1181P-201ENST00000384191 106 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 SNORD51-201ENST00000384320 80 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 MIR34B-201ENST00000385076 84 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 HMGB1P17-201ENST00000403495 628 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 BX323014.1-201ENST00000412876 237 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 RAD23BP2-201ENST00000416003 1207 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AL356968.1-201ENST00000416622 474 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 MTCO3P12-201ENST00000416718 547 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 RPL23AP82-202ENST00000427528 469 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 DPPA2P1-201ENST00000428060 556 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 MTND4LP10-201ENST00000435146 291 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AL445669.2-201ENST00000454425 421 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 RPS4XP2-201ENST00000458402 793 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 RNU7-136P-201ENST00000458819 69 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 snoU109.4-201ENST00000458953 143 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AP001992.1-205ENST00000462248 379 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AC010401.1-201ENST00000463867 348 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 CENPBD1P1-201ENST00000464061 469 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 HMGB1P25-201ENST00000468402 607 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 RPL7P5-201ENST00000471472 736 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 RPL23AP55-201ENST00000498163 452 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 COX7A2P2-201ENST00000505291 250 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 SNORA31.20-201ENST00000517111 133 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 RNU6-1073P-201ENST00000517182 106 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 MRPS36P3-201ENST00000519284 130 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AC012669.1-201ENST00000603209 283 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AC024220.1-201ENST00000603675 484 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AC009159.2-201ENST00000617603 606 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AC079228.1-201ENST00000624774 1049 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 Z83843.1-201ENST00000604070 3685 ntBASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.31□□□□□ -1.88
CCM2Q9BSQ5 AC058791.1-201ENST00000608412 3198 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC004925.1-201ENST00000624256 2706 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AL022578.1-201ENST00000439330 1433 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 MIR30E-201ENST00000362104 92 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 RNU6-1214P-201ENST00000363650 109 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 SNORA4.1-201ENST00000364263 144 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 MTCYBP38-201ENST00000417160 1123 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 RPL7P30-201ENST00000420888 709 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 RPL31P12-201ENST00000422587 358 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AL953862.1-201ENST00000423016 168 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AL451062.2-201ENST00000427515 271 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 MUPP-201ENST00000438111 566 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 MTND2P19-201ENST00000449129 1012 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 HMGN2P16-201ENST00000456802 261 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 ST13P14-201ENST00000474095 734 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC006483.1-201ENST00000487308 313 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC092185.1-201ENST00000491371 97 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC112673.1-201ENST00000513168 575 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 SNORA3.4-201ENST00000515969 96 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC109635.4-202ENST00000531666 412 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC023538.1-201ENST00000534576 736 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC015917.1-201ENST00000579654 510 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 MIR3690-201ENST00000580266 75 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC006539.2-201ENST00000601729 572 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 BBIP1P1-201ENST00000602999 279 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC010738.1-201ENST00000604970 987 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AL139418.1-201ENST00000613613 177 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC140725.3-201ENST00000616193 880 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AP000676.4-201ENST00000624659 623 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AC097714.1-201ENST00000511272 1647 ntBASIC3.3□□□□□ -1.88
CCM2Q9BSQ5 AP001350.1-201ENST00000601906 1524 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms