Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 OR4R2P-201ENST00000530815 597 ntBASIC1.68□□□□□ -2.14
VPS25Q9BRG1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC1.68□□□□□ -2.14
VPS25Q9BRG1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.68□□□□□ -2.14
VPS25Q9BRG1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC1.68□□□□□ -2.14
VPS25Q9BRG1 AL049874.4-201ENST00000557593 255 ntBASIC1.68□□□□□ -2.14
VPS25Q9BRG1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.68□□□□□ -2.14
VPS25Q9BRG1 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
VPS25Q9BRG1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS25Q9BRG1 MIR3935-201ENST00000583472 104 ntBASIC1.68□□□□□ -2.14
VPS25Q9BRG1 AC025165.5-201ENST00000602802 578 ntBASIC1.68□□□□□ -2.14
VPS25Q9BRG1 AL354950.1-201ENST00000614150 568 ntBASIC1.68□□□□□ -2.14
VPS25Q9BRG1 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
VPS25Q9BRG1 AC090116.1-201ENST00000615679 446 ntBASIC1.68□□□□□ -2.14
VPS25Q9BRG1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.68□□□□□ -2.14
VPS25Q9BRG1 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.68□□□□□ -2.14
VPS25Q9BRG1 AP003399.1-201ENST00000637534 361 ntBASIC1.68□□□□□ -2.14
VPS25Q9BRG1 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
VPS25Q9BRG1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS25Q9BRG1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS25Q9BRG1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS25Q9BRG1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
VPS25Q9BRG1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS25Q9BRG1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 OR5BR1P-201ENST00000524992 1330 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 RNA5SP68-201ENST00000363885 119 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 RNA5-8SP4-201ENST00000365096 150 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AL353692.2-201ENST00000407054 335 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC010385.1-201ENST00000412374 256 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 RPS29P4-201ENST00000414733 161 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 FCF1P2-201ENST00000415284 583 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC018644.1-201ENST00000429934 551 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 RPL23AP83-201ENST00000434984 473 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC004866.2-201ENST00000438285 481 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC006028.1-201ENST00000438379 402 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC072039.1-201ENST00000477611 581 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 RPL23AP41-201ENST00000484754 458 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC008885.2-201ENST00000509506 930 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 MTND4LP31-201ENST00000514859 294 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 SCGB1D5P-201ENST00000515134 247 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC100870.1-201ENST00000522035 505 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 EIF4EP5-201ENST00000528228 640 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC105137.2-201ENST00000569073 466 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC022662.1-201ENST00000580252 331 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC008277.2-201ENST00000605196 797 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC004908.2-201ENST00000609090 574 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AL355365.1-201ENST00000616480 294 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC109809.1-201ENST00000619665 545 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC018692.3-201ENST00000623929 123 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC244258.1-201ENST00000637553 1071 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 MIR622-201ENST00000638396 96 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC009093.8-201ENST00000641769 292 ntBASIC1.67□□□□□ -2.14
VPS25Q9BRG1 AC109315.1-201ENST00000584143 1347 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
VPS25Q9BRG1 RPL32P3-201ENST00000359025 275 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 RNU6-173P-201ENST00000364215 104 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 RNU6-673P-201ENST00000365084 104 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 OR52E6-202ENST00000379946 954 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 SNORA5A-201ENST00000384111 134 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 RN7SKP159-201ENST00000410657 292 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC236972.1-201ENST00000433225 199 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC098826.1-201ENST00000433943 471 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC092573.2-201ENST00000434546 243 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 RPL21P133-201ENST00000443666 476 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS25Q9BRG1 EEF1B2P7-201ENST00000451177 676 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 NIPA2P5-201ENST00000452282 464 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC117440.1-201ENST00000474107 571 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC109925.1-201ENST00000478069 331 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC106707.2-201ENST00000484182 374 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC008676.3-201ENST00000521237 435 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS25Q9BRG1 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms