Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU1-45P-201ENST00000517191 141 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AC022968.1-201ENST00000567372 442 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AC009101.1-201ENST00000568135 242 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AC034105.4-201ENST00000568304 277 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AC025627.2-201ENST00000576220 160 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 RN7SL703P-201ENST00000578485 302 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AC009977.1-201ENST00000586015 570 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AL606490.9-201ENST00000603331 271 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AC011468.4-201ENST00000603942 409 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AC006566.1-201ENST00000608943 513 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 TUG1_1.1-201ENST00000610654 145 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 MIR6868-201ENST00000611215 58 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 MIR7151-201ENST00000617477 60 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AL773545.4-201ENST00000637262 310 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AL513478.4-201ENST00000641636 310 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AC009902.3-201ENST00000606235 2172 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 BDP1P-201ENST00000582658 1990 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 RNU1-64P-201ENST00000365443 163 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AL603766.1-201ENST00000407763 664 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 RPS7P15-201ENST00000415804 584 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 SPA17P1-201ENST00000416656 452 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AC244098.2-201ENST00000422068 99 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 MTND1P9-201ENST00000453775 944 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AC234775.1-201ENST00000454247 670 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 VN1R105P-201ENST00000486595 910 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 NPM1P41-201ENST00000512920 831 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 RNU6-528P-201ENST00000516926 100 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 RNU6-201P-201ENST00000517100 61 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AP000907.2-201ENST00000530827 353 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 RPL21P5-201ENST00000554662 472 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 MIR5684-201ENST00000585074 65 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AC012669.1-201ENST00000603209 283 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AC006254.3-201ENST00000603353 884 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AP001506.1-201ENST00000615444 211 ntBASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.77□□□□□ -1.65
CHMP4CQ96CF2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 FAM35DP-201ENST00000323387 2712 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AC007685.1-201ENST00000329806 452 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 RNU6-1078P-201ENST00000364522 103 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 MTCO3P12-201ENST00000416718 547 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 BX890604.2-201ENST00000427883 474 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 RPL7P24-201ENST00000493052 752 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AC020593.1-201ENST00000507399 299 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 NDUFB4P2-201ENST00000509515 391 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 IGKV2D-23-201ENST00000518179 286 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AC022616.6-201ENST00000520479 119 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AP004371.1-201ENST00000525240 214 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AL121603.1-201ENST00000553815 142 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AL157394.1-201ENST00000562983 1224 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 SNORD84-203ENST00000584275 78 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AC068790.3-201ENST00000602988 553 ntBASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CHMP4CQ96CF2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 MTND5P33-201ENST00000571250 1450 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms