Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HPS3Q969F9 Y_RNA.548-201ENST00000384656 105 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 SNORA57.1-201ENST00000391227 145 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 RPS3AP36-201ENST00000398190 775 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 RNA5SP306-201ENST00000411087 107 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 CYP4F29P-201ENST00000420685 446 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.52□□□□□ -1.69
HPS3Q969F9 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS3Q969F9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS3Q969F9 ISCA1P6-201ENST00000427740 390 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS3Q969F9 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS3Q969F9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS3Q969F9 RPS4XP4-201ENST00000443195 763 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 RAC1P7-201ENST00000445367 377 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 MTND1P1-201ENST00000445453 368 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS3Q969F9 RPS3AP17-201ENST00000472594 777 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
HPS3Q969F9 AC093278.1-201ENST00000494700 600 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.52□□□□□ -1.69
HPS3Q969F9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS3Q969F9 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HPS3Q969F9 SNORA31.9-201ENST00000516429 84 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.52□□□□□ -1.69
HPS3Q969F9 AC135001.1-201ENST00000544546 283 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AC126177.3-201ENST00000551839 688 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AL121603.1-201ENST00000553815 142 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS3Q969F9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS3Q969F9 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS3Q969F9 AC012417.1-201ENST00000582307 1039 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 SNORD84-203ENST00000584275 78 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS3Q969F9 AC245014.2-201ENST00000603689 287 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AL022154.1-201ENST00000604698 785 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AC246785.4-201ENST00000605374 287 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AC004908.2-201ENST00000609090 574 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.52□□□□□ -1.69
HPS3Q969F9 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HPS3Q969F9 MIR8059-201ENST00000620427 81 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AC112204.3-201ENST00000623822 332 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AL159972.1-201ENST00000625150 448 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AL773545.4-201ENST00000637262 310 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 AL513478.4-201ENST00000641636 310 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 MTND5P26-201ENST00000426018 1752 ntBASIC4.52□□□□□ -1.69
HPS3Q969F9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HPS3Q969F9 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HPS3Q969F9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HPS3Q969F9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HPS3Q969F9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HPS3Q969F9 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HPS3Q969F9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HPS3Q969F9 AC024560.2-201ENST00000507981 1497 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.51□□□□□ -1.69
HPS3Q969F9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HPS3Q969F9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
HPS3Q969F9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HPS3Q969F9 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HPS3Q969F9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HPS3Q969F9 Y_RNA.41-201ENST00000362646 102 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 SNORD35B-201ENST00000363660 87 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HPS3Q969F9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HPS3Q969F9 BX295541.1-201ENST00000417774 250 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 MTCO3P30-201ENST00000426425 670 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.51□□□□□ -1.69
HPS3Q969F9 C8orf59P1-201ENST00000429930 303 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 AC119618.1-201ENST00000434191 222 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.51□□□□□ -1.69
HPS3Q969F9 TBCAP1-201ENST00000436520 327 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.51□□□□□ -1.69
HPS3Q969F9 RPS17P13-201ENST00000448974 407 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.51□□□□□ -1.69
HPS3Q969F9 AC010655.1-201ENST00000449336 292 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.51□□□□□ -1.69
HPS3Q969F9 RPL23AP2-201ENST00000471227 466 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 RPL9P33-201ENST00000484311 566 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 RN7SL604P-201ENST00000492589 296 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.51□□□□□ -1.69
HPS3Q969F9 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.51□□□□□ -1.69
HPS3Q969F9 MIR2116-201ENST00000517221 80 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 IGKV2-38-201ENST00000517443 247 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.51□□□□□ -1.69
HPS3Q969F9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.51□□□□□ -1.69
HPS3Q969F9 AC007424.1-203ENST00000554613 687 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 AC025884.1-201ENST00000556034 378 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.51□□□□□ -1.69
HPS3Q969F9 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.51□□□□□ -1.69
HPS3Q969F9 AL391840.1-201ENST00000571144 367 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 MIR1254-2-201ENST00000579553 63 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.51□□□□□ -1.69
HPS3Q969F9 COX6CP3-201ENST00000580869 223 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 MIR5684-201ENST00000585074 65 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 AL158211.4-201ENST00000606988 584 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 AC108747.1-201ENST00000609508 535 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 AL161734.1-201ENST00000609720 557 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 AC013476.2-201ENST00000614456 459 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 AC073534.2-201ENST00000620377 381 ntBASIC4.51□□□□□ -1.69
HPS3Q969F9 AC138649.3-201ENST00000622154 254 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms