Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC090774.1-201ENST00000435925 246 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 RPL26P6-201ENST00000440913 438 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 AC023141.8-201ENST00000442554 208 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-CQ95604 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-CQ95604 U8.21-201ENST00000459536 136 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 COX6CP14-201ENST00000469580 174 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 Y_RNA.683-201ENST00000516508 93 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 IGKV2D-36-201ENST00000518643 226 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.06□□□□□ -1.44
HLA-CQ95604 AC018552.1-201ENST00000562099 811 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-CQ95604 MIR4433B-201ENST00000581329 102 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 AC139493.1-201ENST00000604368 397 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 AC006077.1-201ENST00000604746 343 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 uc_338.18-201ENST00000615451 175 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 U2.14-201ENST00000615943 113 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 AP000346.3-201ENST00000622821 210 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-CQ95604 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HLA-CQ95604 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HLA-CQ95604 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-CQ95604 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-CQ95604 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-CQ95604 HSPA8P1-201ENST00000425843 1833 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-CQ95604 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HLA-CQ95604 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-CQ95604 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-CQ95604 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-CQ95604 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-CQ95604 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-CQ95604 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-CQ95604 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
HLA-CQ95604 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-CQ95604 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-CQ95604 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-CQ95604 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-CQ95604 PRO1804-201ENST00000623780 2050 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-CQ95604 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-CQ95604 CLCA3P-203ENST00000490028 2781 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-CQ95604 AL159987.1-201ENST00000347911 293 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HLA-CQ95604 RNA5SP52-201ENST00000362448 134 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 RNU1-106P-201ENST00000384382 164 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-CQ95604 RPL7P49-201ENST00000471402 708 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 AC083982.1-201ENST00000485679 344 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 RPS15AP34-201ENST00000487776 387 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 RPS24P16-201ENST00000497294 392 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 SEPT14P8-201ENST00000508026 178 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-CQ95604 AL359273.1-201ENST00000510918 627 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 RN7SKP277-201ENST00000516895 283 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 MRPS36P4-201ENST00000534436 298 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-CQ95604 RPL23AP87-202ENST00000573039 466 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-CQ95604 AC006116.3-201ENST00000592968 361 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-CQ95604 AC098826.3-201ENST00000603823 466 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 AL450472.3-201ENST00000615578 367 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
HLA-CQ95604 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-CQ95604 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HLA-CQ95604 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-CQ95604 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
HLA-CQ95604 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-CQ95604 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-CQ95604 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-CQ95604 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-CQ95604 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HLA-CQ95604 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-CQ95604 AC087516.1-201ENST00000561236 2428 ntBASIC6.05□□□□□ -1.44
HLA-CQ95604 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-CQ95604 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HLA-CQ95604 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
HLA-CQ95604 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-CQ95604 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
HLA-CQ95604 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-CQ95604 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-CQ95604 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-CQ95604 AC139769.1-204ENST00000472297 1931 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-CQ95604 RNU6-989P-201ENST00000362756 107 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 RNU6-1155P-201ENST00000363554 107 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-CQ95604 MIR135A2-201ENST00000384854 100 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 RNA5SP56-201ENST00000410277 118 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 AC092447.6-201ENST00000414578 210 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 AC093162.1-201ENST00000419682 124 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 AC245028.1-201ENST00000423259 256 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-CQ95604 VTI1BP4-201ENST00000427516 527 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-CQ95604 USP9YP7-201ENST00000436723 430 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms