Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RPS3AP50-201ENST00000487064 803 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC055855.1-201ENST00000489563 579 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 RPL7P24-201ENST00000493052 752 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC099522.1-202ENST00000514718 367 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 MTCO2P32-201ENST00000514865 403 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 Y_RNA.695-201ENST00000516715 107 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 IGKV2D-19-201ENST00000523346 262 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 OR4T1P-201ENST00000554933 911 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC022968.1-201ENST00000567372 442 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC38Q502W7 MIR548AB-201ENST00000584917 84 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 MIR3138-201ENST00000585238 82 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 IPO5P1-202ENST00000600039 287 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 AL359999.1-201ENST00000604513 294 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC025594.3-201ENST00000613068 790 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC38Q502W7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC38Q502W7 LARP1BP1-201ENST00000506036 1359 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 AL138713.1-201ENST00000624026 2130 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC066616.2-201ENST00000559334 1481 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC38Q502W7 SNORD35B-201ENST00000363660 87 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 SNORA70.2-201ENST00000364506 135 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC38Q502W7 Y_RNA.608-201ENST00000410647 95 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 RPS7P13-201ENST00000413955 498 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 RPL23AP38-201ENST00000423801 469 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AL353777.1-201ENST00000425552 326 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 MTATP6P4-201ENST00000427725 675 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC024082.2-201ENST00000434771 238 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 MTND4P32-201ENST00000437189 1237 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 AL049734.2-201ENST00000441066 616 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC38Q502W7 RNU7-170P-201ENST00000459303 61 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 UQCRHP4-201ENST00000471686 272 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC105137.1-201ENST00000484355 562 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC068724.1-201ENST00000487100 792 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC091167.1-201ENST00000492017 396 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 NDUFB4P9-201ENST00000511646 388 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC091965.2-201ENST00000512324 613 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC026726.1-201ENST00000512859 601 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 NPM1P41-201ENST00000512920 831 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 RN7SKP289-201ENST00000517244 295 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC022878.1-201ENST00000530684 149 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AL133271.1-201ENST00000538229 291 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 ZNF519P3-201ENST00000557158 1032 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 COX6CP3-201ENST00000580869 223 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 AP001981.2-201ENST00000603241 418 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC112191.3-201ENST00000604371 277 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC239868.4-201ENST00000608318 671 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC004908.2-201ENST00000609090 574 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AL355472.4-201ENST00000610233 626 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC138749.5-201ENST00000611461 208 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC116165.2-201ENST00000616705 206 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC009159.1-201ENST00000618386 642 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC009878.1-201ENST00000621819 340 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 AC112204.3-201ENST00000623822 332 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 MIR3653-201ENST00000625572 110 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 MIR4275-201ENST00000636486 87 ntBASIC4.13□□□□□ -1.75
CCDC38Q502W7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC38Q502W7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC38Q502W7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC38Q502W7 IPO8P1-201ENST00000455509 3109 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 AC021755.1-201ENST00000559747 1447 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC38Q502W7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC38Q502W7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms