Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL732372.2-225ENST00000642124 456 ntBASIC5.29□□□□□ -1.56
SOX4Q06945 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SOX4Q06945 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
SOX4Q06945 MFSD8-216ENST00000641147 4009 ntBASIC5.29□□□□□ -1.56
SOX4Q06945 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SOX4Q06945 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SOX4Q06945 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX4Q06945 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SOX4Q06945 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX4Q06945 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SOX4Q06945 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX4Q06945 BDP1P-201ENST00000582658 1990 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX4Q06945 SNORD3E-201ENST00000362899 217 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 Y_RNA.257-201ENST00000364596 102 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 RNU6-1293P-201ENST00000384077 107 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 SNORA24.1-201ENST00000384401 135 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 RNU6-1026P-201ENST00000384465 108 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 Y_RNA.576-201ENST00000384781 102 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 MIR450B-201ENST00000401182 78 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX4Q06945 RNU2-36P-201ENST00000410361 191 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 RNU4-25P-201ENST00000410569 230 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 RN7SKP100-201ENST00000411258 284 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 AC080125.1-201ENST00000414888 684 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 AC079809.1-201ENST00000415468 276 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 DPH3P2-201ENST00000422618 250 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 RPL7P46-201ENST00000425129 740 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 RSL24D1P6-201ENST00000426934 401 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX4Q06945 SNAP23P1-201ENST00000433229 246 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX4Q06945 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX4Q06945 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX4Q06945 RPS24P13-201ENST00000442520 397 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX4Q06945 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX4Q06945 AC006511.1-201ENST00000470614 315 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 RPS29P22-201ENST00000472363 168 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 AC104564.1-201ENST00000493028 407 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 AC008897.1-201ENST00000494006 347 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 AC104806.1-201ENST00000508720 308 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 RNU6-189P-201ENST00000516120 101 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 RNA5SP228-201ENST00000516232 133 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 AC087854.1-201ENST00000519706 414 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX4Q06945 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX4Q06945 AC018442.3-201ENST00000523025 183 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 FAM60DP-201ENST00000524174 632 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
SOX4Q06945 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX4Q06945 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX4Q06945 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.28□□□□□ -1.56
SOX4Q06945 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX4Q06945 AC018889.1-201ENST00000605372 397 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 AC100812.1-201ENST00000607622 580 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.28□□□□□ -1.56
SOX4Q06945 PISRT1.1-201ENST00000616930 107 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 AC103705.1-201ENST00000619013 241 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 RNU6-156P-201ENST00000621869 107 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 AC019206.1-201ENST00000621938 425 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 AL136313.1-201ENST00000624804 202 ntBASIC5.28□□□□□ -1.56
SOX4Q06945 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SOX4Q06945 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX4Q06945 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX4Q06945 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX4Q06945 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX4Q06945 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX4Q06945 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SOX4Q06945 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
SOX4Q06945 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX4Q06945 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX4Q06945 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX4Q06945 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX4Q06945 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX4Q06945 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX4Q06945 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX4Q06945 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX4Q06945 SDAD1P1-202ENST00000524156 2051 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SOX4Q06945 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX4Q06945 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX4Q06945 RNU6-99P-201ENST00000364721 107 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 RNU6-61P-201ENST00000365528 109 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 RNU6-328P-201ENST00000390887 106 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 U3.30-201ENST00000391308 210 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SOX4Q06945 VTI1BP4-201ENST00000427516 527 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 RPL36AP6-201ENST00000435770 321 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX4Q06945 MTND5P28-201ENST00000438005 1594 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 MTND2P29-201ENST00000438595 412 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX4Q06945 AL162388.1-201ENST00000450912 352 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX4Q06945 GSTA11P-201ENST00000452866 669 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 SNORD121B-201ENST00000458838 81 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 RPS20P21-201ENST00000466859 343 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 ENPP7P11-201ENST00000505915 627 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 RNU6-1016P-201ENST00000516689 94 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms