| PAX8 | Q06710 | IDE-202 | ENST00000371581 | 4480 nt | TSL 2 BASIC | 3.07 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | ADAM28-201 | ENST00000265769 | 7052 nt | APPRIS P1 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | TSHB-201 | ENST00000256592 | 537 nt | APPRIS P1 TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | COX7B2-201 | ENST00000355591 | 542 nt | APPRIS P2 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | RNA5SP51-201 | ENST00000364750 | 119 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | RAD17-208 | ENST00000380774 | 2117 nt | APPRIS P1 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | RNU6-1119P-201 | ENST00000384349 | 108 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | RNU6-769P-201 | ENST00000384407 | 104 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | Y_RNA.505-201 | ENST00000384489 | 102 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | U8.14-201 | ENST00000390843 | 143 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | RNA5SP424-201 | ENST00000390988 | 115 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | C2orf73-202 | ENST00000398634 | 1921 nt | APPRIS P1 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | RHEBP3-201 | ENST00000411920 | 351 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC013286.1-201 | ENST00000412137 | 381 nt | TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AL158834.2-201 | ENST00000415731 | 696 nt | TSL 2 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC010745.2-201 | ENST00000420404 | 839 nt | TSL 3 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | ACADM-203 | ENST00000420607 | 1332 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | PSMA6P3-201 | ENST00000428242 | 164 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | OR51AB1P-201 | ENST00000429046 | 620 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AL596220.1-202 | ENST00000429768 | 314 nt | TSL 3 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AL162734.1-201 | ENST00000432858 | 157 nt | TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AL031667.1-201 | ENST00000440222 | 725 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | C6orf10-203 | ENST00000442822 | 1696 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | HSPE1P28-201 | ENST00000443139 | 211 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | NUTM2A-AS1-209 | ENST00000447424 | 571 nt | TSL 3 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | RPS3AP46-201 | ENST00000448352 | 682 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | LINC01691-201 | ENST00000450546 | 426 nt | TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | CSN1S2AP-201 | ENST00000451783 | 779 nt | TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | ETV5-AS1-201 | ENST00000453370 | 560 nt | TSL 4 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | DNAJC19P1-201 | ENST00000455312 | 319 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | BTF3P5-201 | ENST00000457252 | 467 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC093297.2-207 | ENST00000505401 | 692 nt | TSL 3 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | MRPL36-203 | ENST00000505818 | 595 nt | APPRIS P1 TSL 3 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC117460.1-201 | ENST00000508964 | 467 nt | TSL 3 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | MTCO3P44-201 | ENST00000510977 | 541 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC024589.1-201 | ENST00000512207 | 263 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AF131216.2-201 | ENST00000512316 | 564 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC096736.1-201 | ENST00000512609 | 947 nt | TSL 3 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | HIGD1AP3-201 | ENST00000515857 | 278 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC090857.2-201 | ENST00000526362 | 723 nt | TSL 2 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AP002748.2-201 | ENST00000528671 | 348 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AP006287.2-201 | ENST00000529036 | 502 nt | TSL 2 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | OR5AP1P-201 | ENST00000529730 | 940 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AL139174.1-201 | ENST00000531489 | 886 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC116535.2-201 | ENST00000532365 | 441 nt | TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC018410.2-201 | ENST00000540410 | 610 nt | TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | CCNG2P1-201 | ENST00000549521 | 1000 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC006960.3-201 | ENST00000561845 | 705 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC025917.1-202 | ENST00000566344 | 635 nt | TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | MIR4307-201 | ENST00000582802 | 84 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | ZNF28-207 | ENST00000594602 | 684 nt | TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC244505.7-201 | ENST00000599675 | 272 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC078795.2-201 | ENST00000602835 | 1252 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | BBIP1P1-201 | ENST00000602999 | 279 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | LLPHP1-201 | ENST00000603571 | 367 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC015871.2-201 | ENST00000603605 | 948 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | RPL23AP92-201 | ENST00000603609 | 255 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | PRELID3BP8-201 | ENST00000604148 | 295 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC112187.2-201 | ENST00000604345 | 283 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | ACTR3BP1-201 | ENST00000605584 | 1247 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AL390208.1-201 | ENST00000605885 | 644 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AL357080.1-201 | ENST00000617394 | 239 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC079684.1-201 | ENST00000621405 | 437 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC004009.2-201 | ENST00000623016 | 728 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC006378.2-201 | ENST00000623178 | 2476 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC072062.1-210 | ENST00000628464 | 1315 nt | TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC093591.3-201 | ENST00000634516 | 308 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC138649.5-201 | ENST00000637456 | 137 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | PPIP5K2-215 | ENST00000613674 | 4933 nt | APPRIS ALT2 TSL 2 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | CNTN6-201 | ENST00000350110 | 3814 nt | APPRIS P1 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | SLC16A10-201 | ENST00000368850 | 10051 nt | TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | RHOT1-204 | ENST00000394692 | 2960 nt | TSL 2 BASIC | 3.06 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | BCLAF1-213 | ENST00000530767 | 4186 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | BAZ2B-204 | ENST00000392783 | 8289 nt | APPRIS P1 TSL 5 BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | ZNF33CP-201 | ENST00000432492 | 2030 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | LINC02393-202 | ENST00000614177 | 1993 nt | TSL 2 BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | P2RY12-201 | ENST00000302632 | 1766 nt | APPRIS P1 TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | KIF21A-203 | ENST00000541463 | 4866 nt | TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | EVI2A-202 | ENST00000461237 | 1540 nt | APPRIS ALT2 TSL 4 BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | CCDC178-205 | ENST00000406524 | 3039 nt | APPRIS ALT2 TSL 5 BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | NMD3P1-201 | ENST00000439704 | 1488 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | SYNE2-202 | ENST00000344113 | 21777 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AL356473.1-201 | ENST00000406203 | 1408 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | TRAPPC13-208 | ENST00000505553 | 1410 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | MTND4P5-201 | ENST00000435821 | 1374 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | MT-ND3-201 | ENST00000361227 | 346 nt | APPRIS P1 BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | RNU1-18P-201 | ENST00000363062 | 164 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | RNU5E-5P-201 | ENST00000365379 | 116 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | HMGN2P8-201 | ENST00000391458 | 268 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | LGALS16-201 | ENST00000392051 | 624 nt | APPRIS P1 TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | SOD2P1-201 | ENST00000396543 | 562 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | RPL7P60-201 | ENST00000397636 | 735 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | HLFP1-201 | ENST00000402375 | 499 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | MIR1305-201 | ENST00000408300 | 86 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | MIR1183-201 | ENST00000408856 | 89 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AL663109.1-201 | ENST00000411498 | 844 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | ATP5A1P2-201 | ENST00000412323 | 255 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | RPL17P12-201 | ENST00000413391 | 526 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AL031779.1-201 | ENST00000415663 | 330 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| PAX8 | Q06710 | AC012065.2-201 | ENST00000421295 | 375 nt | BASIC | 3.05 | □□□□□ -1.92 | | |