Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
GABPB1Q06547 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
GABPB1Q06547 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
GABPB1Q06547 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.21□□□□□ -1.9
GABPB1Q06547 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
GABPB1Q06547 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 RNU6-799P-201ENST00000363567 107 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 Y_RNA.408-201ENST00000383987 102 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 HMGB1P17-201ENST00000403495 628 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 SNORA3.3-201ENST00000408712 125 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.21□□□□□ -1.9
GABPB1Q06547 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
GABPB1Q06547 RNA5SP317-201ENST00000410176 116 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 RNA5SP311-201ENST00000411290 116 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 AC068533.2-201ENST00000411872 306 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.21□□□□□ -1.9
GABPB1Q06547 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.21□□□□□ -1.9
GABPB1Q06547 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
GABPB1Q06547 AL050321.1-201ENST00000432363 400 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.21□□□□□ -1.9
GABPB1Q06547 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.21□□□□□ -1.9
GABPB1Q06547 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
GABPB1Q06547 AL590664.1-201ENST00000448065 339 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
GABPB1Q06547 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.21□□□□□ -1.9
GABPB1Q06547 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.21□□□□□ -1.9
GABPB1Q06547 RPL30P14-201ENST00000482744 348 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.21□□□□□ -1.9
GABPB1Q06547 AC023424.2-201ENST00000493479 777 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 RNA5SP315-201ENST00000516340 116 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 RNA5SP312-201ENST00000517068 116 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
GABPB1Q06547 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 AC025884.1-201ENST00000556034 378 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 AP005205.1-201ENST00000563503 508 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 MIR3160-1-201ENST00000577972 85 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 RN7SL339P-201ENST00000580597 296 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.21□□□□□ -1.9
GABPB1Q06547 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.21□□□□□ -1.9
GABPB1Q06547 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.21□□□□□ -1.9
GABPB1Q06547 BNIP3P11-201ENST00000603878 563 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 AC106900.2-201ENST00000604994 317 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 AC010297.1-201ENST00000623948 149 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.21□□□□□ -1.9
GABPB1Q06547 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
GABPB1Q06547 GABRG2-229ENST00000641017 3628 ntBASIC3.21□□□□□ -1.9
GABPB1Q06547 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.21□□□□□ -1.9
GABPB1Q06547 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPB1Q06547 AL513185.3-201ENST00000433335 1300 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.2□□□□□ -1.9
GABPB1Q06547 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.2□□□□□ -1.9
GABPB1Q06547 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
GABPB1Q06547 TAB3P1-202ENST00000452645 1634 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GABPB1Q06547 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
GABPB1Q06547 RNU6-560P-201ENST00000364007 108 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 RNU6-1027P-201ENST00000383998 107 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 RNU6-413P-201ENST00000384115 107 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 RNU6-882P-201ENST00000391025 103 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 SNORA57.1-201ENST00000391227 145 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 RPS4XP3-201ENST00000398541 413 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 AL592310.1-201ENST00000414330 671 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.2□□□□□ -1.9
GABPB1Q06547 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GABPB1Q06547 MTCO2P5-201ENST00000422621 426 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 RPL7P2-201ENST00000427639 268 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.2□□□□□ -1.9
GABPB1Q06547 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPB1Q06547 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPB1Q06547 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.2□□□□□ -1.9
GABPB1Q06547 HSFY6P-201ENST00000445573 403 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 OR6K5P-201ENST00000447050 945 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 AC007327.1-201ENST00000447461 264 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 AC009961.3-201ENST00000449832 765 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 RPL18AP17-201ENST00000455326 198 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 MTND2P39-201ENST00000457230 764 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.2□□□□□ -1.9
GABPB1Q06547 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.2□□□□□ -1.9
GABPB1Q06547 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GABPB1Q06547 MTND3P3-201ENST00000505004 126 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPB1Q06547 AC113420.1-201ENST00000507903 571 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 CBX3P3-201ENST00000508108 532 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPB1Q06547 SCARNA13-201ENST00000516672 275 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPB1Q06547 AC021451.1-201ENST00000523498 1129 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.2□□□□□ -1.9
GABPB1Q06547 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPB1Q06547 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
GABPB1Q06547 HSPE1P20-201ENST00000538133 289 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.2□□□□□ -1.9
GABPB1Q06547 AC120057.2-201ENST00000571520 271 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.2□□□□□ -1.9
GABPB1Q06547 AL356575.1-201ENST00000603008 283 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 DUXAP11-201ENST00000603858 526 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 AC067959.1-201ENST00000604334 379 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.2□□□□□ -1.9
GABPB1Q06547 TUG1_1.1-201ENST00000610654 145 ntBASIC3.2□□□□□ -1.9
GABPB1Q06547 AC024941.1-201ENST00000612250 334 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms