Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC009812.4-201ENST00000569134 1805 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 TEX21P-201ENST00000447107 1476 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CX3CL1P78423 RNU5E-8P-201ENST00000363502 116 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 Y_RNA.436-201ENST00000384097 102 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 SNORA40.3-201ENST00000390964 122 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 RN7SKP33-201ENST00000410942 340 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.24□□□□□ -1.89
CX3CL1P78423 MORF4L1P6-201ENST00000418771 268 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.24□□□□□ -1.89
CX3CL1P78423 AC006366.1-201ENST00000422002 759 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.24□□□□□ -1.89
CX3CL1P78423 BX890604.2-201ENST00000427883 474 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC087650.1-201ENST00000431445 468 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.24□□□□□ -1.89
CX3CL1P78423 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.24□□□□□ -1.89
CX3CL1P78423 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CX3CL1P78423 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.24□□□□□ -1.89
CX3CL1P78423 PDSS1P2-201ENST00000449397 678 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 RPS11P1-201ENST00000451072 473 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 SNORD42A-201ENST00000459584 64 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 RPL7P15-201ENST00000461190 712 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.24□□□□□ -1.89
CX3CL1P78423 ACTR3P3-201ENST00000480448 893 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 RPL7P24-201ENST00000493052 752 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 NIPA2P2-201ENST00000496376 1083 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC135721.1-201ENST00000497954 479 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.24□□□□□ -1.89
CX3CL1P78423 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.24□□□□□ -1.89
CX3CL1P78423 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.24□□□□□ -1.89
CX3CL1P78423 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.24□□□□□ -1.89
CX3CL1P78423 AC010342.1-201ENST00000514047 877 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.24□□□□□ -1.89
CX3CL1P78423 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.24□□□□□ -1.89
CX3CL1P78423 RN7SKP122-201ENST00000515923 296 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 IGKV2-38-201ENST00000517443 247 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AP003467.2-201ENST00000520175 319 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.24□□□□□ -1.89
CX3CL1P78423 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CX3CL1P78423 AP002453.2-201ENST00000533503 320 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.24□□□□□ -1.89
CX3CL1P78423 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.24□□□□□ -1.89
CX3CL1P78423 AC024909.2-201ENST00000553035 286 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.24□□□□□ -1.89
CX3CL1P78423 RPL21P5-201ENST00000554662 472 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AL157394.1-201ENST00000562983 1224 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.24□□□□□ -1.89
CX3CL1P78423 AC025627.2-201ENST00000576220 160 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.24□□□□□ -1.89
CX3CL1P78423 COX6CP3-201ENST00000580869 223 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 RN7SL600P-201ENST00000581811 299 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 MIR5684-201ENST00000585074 65 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.24□□□□□ -1.89
CX3CL1P78423 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 SEPT7P9-203ENST00000604116 343 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AP001330.4-201ENST00000604350 154 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC104662.1-201ENST00000604448 511 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC012443.1-201ENST00000605605 231 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC007038.2-201ENST00000608095 740 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC131902.3-201ENST00000611767 581 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 MIR7151-201ENST00000617477 60 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CX3CL1P78423 AC009509.4-201ENST00000619202 509 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC068137.4-201ENST00000638485 296 ntBASIC3.24□□□□□ -1.89
CX3CL1P78423 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.24□□□□□ -1.89
CX3CL1P78423 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CX3CL1P78423 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CX3CL1P78423 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CX3CL1P78423 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CL1P78423 AC024560.2-201ENST00000507981 1497 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CL1P78423 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CX3CL1P78423 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.23□□□□□ -1.89
CX3CL1P78423 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CL1P78423 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CL1P78423 RNA5SP443-201ENST00000363083 132 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 RNU6-173P-201ENST00000364215 104 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CX3CL1P78423 SNORA75-201ENST00000384158 137 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 RNU6-297P-201ENST00000384636 107 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 RPS26P8-201ENST00000393490 348 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.23□□□□□ -1.89
CX3CL1P78423 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.23□□□□□ -1.89
CX3CL1P78423 AL136372.1-201ENST00000403060 228 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 FCF1P10-201ENST00000407590 479 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 RHEBP3-201ENST00000411920 351 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 HSPE1P12-201ENST00000412576 301 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.23□□□□□ -1.89
CX3CL1P78423 RPL7AP73-201ENST00000413490 353 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CL1P78423 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CL1P78423 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CL1P78423 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CL1P78423 MTATP6P4-201ENST00000427725 675 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.23□□□□□ -1.89
CX3CL1P78423 AL358472.1-201ENST00000431295 329 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC024082.2-201ENST00000434771 238 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms