Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AL118520.1-201ENST00000450770 291 ntBASIC1.88□□□□□ -2.11
LSM3P62310 AC010099.1-201ENST00000455434 375 ntBASIC1.88□□□□□ -2.11
LSM3P62310 MRPL42P6-201ENST00000486397 371 ntBASIC1.88□□□□□ -2.11
LSM3P62310 AC111193.1-201ENST00000504097 155 ntBASIC1.88□□□□□ -2.11
LSM3P62310 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LSM3P62310 AC008716.1-201ENST00000511084 513 ntBASIC1.88□□□□□ -2.11
LSM3P62310 SNORA31.8-201ENST00000516327 108 ntBASIC1.88□□□□□ -2.11
LSM3P62310 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LSM3P62310 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.88□□□□□ -2.11
LSM3P62310 MIR4697-201ENST00000582977 78 ntBASIC1.88□□□□□ -2.11
LSM3P62310 OR1M4P-201ENST00000589199 287 ntBASIC1.88□□□□□ -2.11
LSM3P62310 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
LSM3P62310 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.88□□□□□ -2.11
LSM3P62310 AC006023.1-201ENST00000603944 259 ntBASIC1.88□□□□□ -2.11
LSM3P62310 ATP1B3P1-201ENST00000605365 821 ntBASIC1.88□□□□□ -2.11
LSM3P62310 AC093732.2-201ENST00000607950 274 ntBASIC1.88□□□□□ -2.11
LSM3P62310 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.88□□□□□ -2.11
LSM3P62310 AC006133.1-201ENST00000617106 264 ntBASIC1.88□□□□□ -2.11
LSM3P62310 AC103798.2-201ENST00000624292 632 ntBASIC1.88□□□□□ -2.11
LSM3P62310 AL137790.1-201ENST00000634283 177 ntBASIC1.88□□□□□ -2.11
LSM3P62310 AC093591.3-201ENST00000634516 308 ntBASIC1.88□□□□□ -2.11
LSM3P62310 AC099654.7-201ENST00000635788 2127 ntBASIC1.88□□□□□ -2.11
LSM3P62310 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LSM3P62310 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LSM3P62310 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
LSM3P62310 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.87□□□□□ -2.11
LSM3P62310 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LSM3P62310 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
LSM3P62310 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LSM3P62310 SFR1P1-201ENST00000403720 688 ntBASIC1.87□□□□□ -2.11
LSM3P62310 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
LSM3P62310 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.87□□□□□ -2.11
LSM3P62310 AC107081.1-201ENST00000414975 361 ntBASIC1.87□□□□□ -2.11
LSM3P62310 RPL21P32-201ENST00000419877 477 ntBASIC1.87□□□□□ -2.11
LSM3P62310 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.87□□□□□ -2.11
LSM3P62310 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.87□□□□□ -2.11
LSM3P62310 MYL8P-204ENST00000431574 518 ntBASIC1.87□□□□□ -2.11
LSM3P62310 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
LSM3P62310 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.87□□□□□ -2.11
LSM3P62310 RPL7P29-201ENST00000437151 728 ntBASIC1.87□□□□□ -2.11
LSM3P62310 AC000041.1-201ENST00000439655 175 ntBASIC1.87□□□□□ -2.11
LSM3P62310 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.87□□□□□ -2.11
LSM3P62310 AC108734.3-201ENST00000481241 1165 ntBASIC1.87□□□□□ -2.11
LSM3P62310 AC022493.1-201ENST00000492984 337 ntBASIC1.87□□□□□ -2.11
LSM3P62310 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC1.87□□□□□ -2.11
LSM3P62310 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.87□□□□□ -2.11
LSM3P62310 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.87□□□□□ -2.11
LSM3P62310 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.87□□□□□ -2.11
LSM3P62310 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.87□□□□□ -2.11
LSM3P62310 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.87□□□□□ -2.11
LSM3P62310 AC087272.1-201ENST00000523624 533 ntBASIC1.87□□□□□ -2.11
LSM3P62310 OR10V3P-201ENST00000525712 725 ntBASIC1.87□□□□□ -2.11
LSM3P62310 OR11H5P-201ENST00000554039 926 ntBASIC1.87□□□□□ -2.11
LSM3P62310 SERPINE4P-201ENST00000554978 281 ntBASIC1.87□□□□□ -2.11
LSM3P62310 AC128687.1-201ENST00000605304 619 ntBASIC1.87□□□□□ -2.11
LSM3P62310 AC138473.1-201ENST00000605717 526 ntBASIC1.87□□□□□ -2.11
LSM3P62310 AC009159.1-201ENST00000618386 642 ntBASIC1.87□□□□□ -2.11
LSM3P62310 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.87□□□□□ -2.11
LSM3P62310 AC098657.3-201ENST00000620434 263 ntBASIC1.87□□□□□ -2.11
LSM3P62310 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.87□□□□□ -2.11
LSM3P62310 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LSM3P62310 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LSM3P62310 RNA5SP139-201ENST00000364340 117 ntBASIC1.86□□□□□ -2.11
LSM3P62310 RNU6-339P-201ENST00000384310 107 ntBASIC1.86□□□□□ -2.11
LSM3P62310 MIR7-3-201ENST00000384898 110 ntBASIC1.86□□□□□ -2.11
LSM3P62310 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LSM3P62310 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.86□□□□□ -2.11
LSM3P62310 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.86□□□□□ -2.11
LSM3P62310 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.86□□□□□ -2.11
LSM3P62310 YME1L1P1-201ENST00000429435 297 ntBASIC1.86□□□□□ -2.11
LSM3P62310 AL050321.1-201ENST00000432363 400 ntBASIC1.86□□□□□ -2.11
LSM3P62310 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.86□□□□□ -2.11
LSM3P62310 IPO7P1-201ENST00000442031 636 ntBASIC1.86□□□□□ -2.11
LSM3P62310 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.86□□□□□ -2.11
LSM3P62310 SETP11-201ENST00000473027 690 ntBASIC1.86□□□□□ -2.11
LSM3P62310 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LSM3P62310 RPS15AP34-201ENST00000487776 387 ntBASIC1.86□□□□□ -2.11
LSM3P62310 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.86□□□□□ -2.11
LSM3P62310 AC025768.1-201ENST00000510057 267 ntBASIC1.86□□□□□ -2.11
LSM3P62310 PRELID3BP4-201ENST00000515476 571 ntBASIC1.86□□□□□ -2.11
LSM3P62310 RNA5SP24-201ENST00000516478 95 ntBASIC1.86□□□□□ -2.11
LSM3P62310 SNORA67.7-201ENST00000516664 135 ntBASIC1.86□□□□□ -2.11
LSM3P62310 AC126177.3-201ENST00000551839 688 ntBASIC1.86□□□□□ -2.11
LSM3P62310 AC010546.1-201ENST00000569391 485 ntBASIC1.86□□□□□ -2.11
LSM3P62310 AC025588.3-201ENST00000604182 274 ntBASIC1.86□□□□□ -2.11
LSM3P62310 AL035413.2-201ENST00000604801 525 ntBASIC1.86□□□□□ -2.11
LSM3P62310 DUXAP9-208ENST00000622815 614 ntBASIC1.86□□□□□ -2.11
LSM3P62310 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.86□□□□□ -2.11
LSM3P62310 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.86□□□□□ -2.11
LSM3P62310 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LSM3P62310 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
LSM3P62310 ZNF734P-201ENST00000419494 1534 ntBASIC1.86□□□□□ -2.11
LSM3P62310 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.85□□□□□ -2.11
LSM3P62310 MTND5P1-201ENST00000445440 1375 ntBASIC1.85□□□□□ -2.11
LSM3P62310 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.85□□□□□ -2.11
LSM3P62310 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LSM3P62310 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LSM3P62310 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
LSM3P62310 AC009414.1-201ENST00000427200 443 ntBASIC1.85□□□□□ -2.11
LSM3P62310 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms