Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 XIAPP1-201ENST00000603162 600 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.6□□□□□ -1.67
GFRA1P56159 AC019278.1-201ENST00000623516 479 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA1P56159 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA1P56159 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
GFRA1P56159 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA1P56159 AP001029.2-203ENST00000589795 4910 ntBASIC4.6□□□□□ -1.67
GFRA1P56159 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA1P56159 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA1P56159 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.6□□□□□ -1.67
GFRA1P56159 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
GFRA1P56159 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
GFRA1P56159 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
GFRA1P56159 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GFRA1P56159 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.59□□□□□ -1.67
GFRA1P56159 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GFRA1P56159 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GFRA1P56159 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GFRA1P56159 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
GFRA1P56159 RN7SKP104-201ENST00000362605 328 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 RNA5SP455-201ENST00000365190 119 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GFRA1P56159 RNU6-76P-201ENST00000384060 104 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 Y_RNA.579-201ENST00000390939 94 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 MIR548K-201ENST00000408406 116 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 RPL37P10-201ENST00000412884 288 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.59□□□□□ -1.67
GFRA1P56159 AC005019.1-201ENST00000436455 431 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.59□□□□□ -1.67
GFRA1P56159 RPL12P3-201ENST00000440080 396 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 AL354714.3-201ENST00000447284 493 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.59□□□□□ -1.67
GFRA1P56159 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.59□□□□□ -1.67
GFRA1P56159 RNU6-953P-201ENST00000459154 107 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 RN7SL443P-201ENST00000464331 290 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GFRA1P56159 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.59□□□□□ -1.67
GFRA1P56159 HMGN1P10-201ENST00000474557 553 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 RPL21P93-201ENST00000480465 489 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 RPS27AP13-201ENST00000498403 237 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 IRF5P1-201ENST00000504852 2164 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 GMPSP1-201ENST00000514075 579 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 Y_RNA.689-201ENST00000516589 107 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.59□□□□□ -1.67
GFRA1P56159 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.59□□□□□ -1.67
GFRA1P56159 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GFRA1P56159 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.59□□□□□ -1.67
GFRA1P56159 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.59□□□□□ -1.67
GFRA1P56159 AC135001.1-201ENST00000544546 283 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.59□□□□□ -1.67
GFRA1P56159 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.59□□□□□ -1.67
GFRA1P56159 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.59□□□□□ -1.67
GFRA1P56159 MTCYBP13-201ENST00000578634 1093 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 AC090337.1-201ENST00000579651 2074 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 AC105254.2-201ENST00000603636 436 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 AL031320.1-201ENST00000604177 357 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 AC104662.1-201ENST00000604448 511 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 AC007619.2-201ENST00000605743 379 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.59□□□□□ -1.67
GFRA1P56159 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.59□□□□□ -1.67
GFRA1P56159 AC084781.2-201ENST00000615568 161 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 MIR6730-201ENST00000622213 67 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.59□□□□□ -1.67
GFRA1P56159 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
GFRA1P56159 AC134503.1-201ENST00000633048 54 ntBASIC4.59□□□□□ -1.67
GFRA1P56159 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
GFRA1P56159 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
GFRA1P56159 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
GFRA1P56159 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA1P56159 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA1P56159 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA1P56159 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA1P56159 AL391684.1-202ENST00000641293 1636 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA1P56159 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
GFRA1P56159 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA1P56159 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA1P56159 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA1P56159 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
GFRA1P56159 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.58□□□□□ -1.68
GFRA1P56159 Y_RNA.339-201ENST00000365325 102 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA1P56159 SNORA2.3-201ENST00000383920 135 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 RNU6-1074P-201ENST00000383995 104 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 RNU6-43P-201ENST00000384302 107 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 SNORA66-201ENST00000384792 133 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 SNORD70.1-201ENST00000391007 85 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.58□□□□□ -1.68
GFRA1P56159 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 BX682237.1-201ENST00000415016 335 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 RPS12P23-201ENST00000419579 400 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 AL139095.3-201ENST00000419672 1203 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.58□□□□□ -1.68
GFRA1P56159 RPS27P18-201ENST00000431701 247 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 BX323845.1-201ENST00000432417 179 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.58□□□□□ -1.68
GFRA1P56159 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms