Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 RNU6-1074P-201ENST00000383995 104 ntBASIC2.58□□□□□ -2
ERFP50548 SNORD116-23-201ENST00000384645 92 ntBASIC2.58□□□□□ -2
ERFP50548 RPL22P22-201ENST00000395439 379 ntBASIC2.58□□□□□ -2
ERFP50548 AP002784.2-201ENST00000397300 549 ntBASIC2.58□□□□□ -2
ERFP50548 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.58□□□□□ -2
ERFP50548 AL592148.1-201ENST00000413568 445 ntBASIC2.58□□□□□ -2
ERFP50548 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.58□□□□□ -2
ERFP50548 RPL21P32-201ENST00000419877 477 ntBASIC2.58□□□□□ -2
ERFP50548 RPL17P35-201ENST00000432217 549 ntBASIC2.58□□□□□ -2
ERFP50548 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.58□□□□□ -2
ERFP50548 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.58□□□□□ -2
ERFP50548 UBBP3-201ENST00000445497 241 ntBASIC2.58□□□□□ -2
ERFP50548 COX6CP18-201ENST00000448769 222 ntBASIC2.58□□□□□ -2
ERFP50548 AC027673.1-201ENST00000456245 405 ntBASIC2.58□□□□□ -2
ERFP50548 AC078857.1-201ENST00000469870 667 ntBASIC2.58□□□□□ -2
ERFP50548 SETP6-201ENST00000479329 568 ntBASIC2.58□□□□□ -2
ERFP50548 GAPDHP39-201ENST00000481866 979 ntBASIC2.58□□□□□ -2
ERFP50548 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.58□□□□□ -2
ERFP50548 AC084024.2-201ENST00000503480 791 ntBASIC2.58□□□□□ -2
ERFP50548 SEM1P1-201ENST00000506694 209 ntBASIC2.58□□□□□ -2
ERFP50548 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.58□□□□□ -2
ERFP50548 AC026412.2-201ENST00000512270 1075 ntBASIC2.58□□□□□ -2
ERFP50548 MTND5P4-201ENST00000514978 288 ntBASIC2.58□□□□□ -2
ERFP50548 SCGB1D5P-201ENST00000515134 247 ntBASIC2.58□□□□□ -2
ERFP50548 RNA5SP341-201ENST00000516261 117 ntBASIC2.58□□□□□ -2
ERFP50548 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.58□□□□□ -2
ERFP50548 CKS1BP7-201ENST00000522230 235 ntBASIC2.58□□□□□ -2
ERFP50548 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.58□□□□□ -2
ERFP50548 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.58□□□□□ -2
ERFP50548 AC087373.1-201ENST00000524920 491 ntBASIC2.58□□□□□ -2
ERFP50548 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.58□□□□□ -2
ERFP50548 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.58□□□□□ -2
ERFP50548 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.58□□□□□ -2
ERFP50548 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.58□□□□□ -2
ERFP50548 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.58□□□□□ -2
ERFP50548 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.58□□□□□ -2
ERFP50548 AC138761.3-201ENST00000579993 334 ntBASIC2.58□□□□□ -2
ERFP50548 MIR3200-201ENST00000580767 85 ntBASIC2.58□□□□□ -2
ERFP50548 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.58□□□□□ -2
ERFP50548 AC002487.1-201ENST00000604565 994 ntBASIC2.58□□□□□ -2
ERFP50548 AC106900.2-201ENST00000604994 317 ntBASIC2.58□□□□□ -2
ERFP50548 AL021368.1-201ENST00000607490 540 ntBASIC2.58□□□□□ -2
ERFP50548 AC024560.3-201ENST00000608482 349 ntBASIC2.58□□□□□ -2
ERFP50548 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.58□□□□□ -2
ERFP50548 AC097372.4-201ENST00000625025 466 ntBASIC2.58□□□□□ -2
ERFP50548 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.58□□□□□ -2
ERFP50548 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.57□□□□□ -2
ERFP50548 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.57□□□□□ -2
ERFP50548 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
ERFP50548 MIR422A-201ENST00000362286 90 ntBASIC2.57□□□□□ -2
ERFP50548 RNU6-115P-201ENST00000364310 107 ntBASIC2.57□□□□□ -2
ERFP50548 SNORD21-201ENST00000383953 95 ntBASIC2.57□□□□□ -2
ERFP50548 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.57□□□□□ -2
ERFP50548 AC016769.3-201ENST00000396562 315 ntBASIC2.57□□□□□ -2
ERFP50548 AL139095.1-201ENST00000404326 391 ntBASIC2.57□□□□□ -2
ERFP50548 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.57□□□□□ -2
ERFP50548 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.57□□□□□ -2
ERFP50548 KRR1P1-201ENST00000419430 803 ntBASIC2.57□□□□□ -2
ERFP50548 SFR1P2-201ENST00000421841 730 ntBASIC2.57□□□□□ -2
ERFP50548 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.57□□□□□ -2
ERFP50548 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.57□□□□□ -2
ERFP50548 AC112653.1-201ENST00000443851 386 ntBASIC2.57□□□□□ -2
ERFP50548 RPS20P24-201ENST00000457473 361 ntBASIC2.57□□□□□ -2
ERFP50548 RPS29P12-201ENST00000460178 152 ntBASIC2.57□□□□□ -2
ERFP50548 AP001992.1-205ENST00000462248 379 ntBASIC2.57□□□□□ -2
ERFP50548 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.57□□□□□ -2
ERFP50548 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.57□□□□□ -2
ERFP50548 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.57□□□□□ -2
ERFP50548 SNORA70.24-201ENST00000517233 118 ntBASIC2.57□□□□□ -2
ERFP50548 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.57□□□□□ -2
ERFP50548 AC100870.1-201ENST00000522035 505 ntBASIC2.57□□□□□ -2
ERFP50548 AC087272.1-201ENST00000523624 533 ntBASIC2.57□□□□□ -2
ERFP50548 OR8K2P-201ENST00000524645 927 ntBASIC2.57□□□□□ -2
ERFP50548 AC006518.2-201ENST00000542513 940 ntBASIC2.57□□□□□ -2
ERFP50548 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.57□□□□□ -2
ERFP50548 AC123904.3-201ENST00000547218 814 ntBASIC2.57□□□□□ -2
ERFP50548 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.57□□□□□ -2
ERFP50548 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.57□□□□□ -2
ERFP50548 ZNF971P-201ENST00000562068 1249 ntBASIC2.57□□□□□ -2
ERFP50548 LARP7P2-201ENST00000575306 125 ntBASIC2.57□□□□□ -2
ERFP50548 BNIP3P11-201ENST00000603878 563 ntBASIC2.57□□□□□ -2
ERFP50548 DPRXP5-201ENST00000604662 539 ntBASIC2.57□□□□□ -2
ERFP50548 AC010297.1-201ENST00000623948 149 ntBASIC2.57□□□□□ -2
ERFP50548 OR5BR1P-201ENST00000524992 1330 ntBASIC2.57□□□□□ -2
ERFP50548 AL035425.3-201ENST00000564206 4996 ntBASIC2.57□□□□□ -2
ERFP50548 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
ERFP50548 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.56□□□□□ -2
ERFP50548 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.56□□□□□ -2
ERFP50548 MIR26A1-201ENST00000362205 77 ntBASIC2.56□□□□□ -2
ERFP50548 RNA5SP139-201ENST00000364340 117 ntBASIC2.56□□□□□ -2
ERFP50548 SNORA71.1-201ENST00000364523 117 ntBASIC2.56□□□□□ -2
ERFP50548 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.56□□□□□ -2
ERFP50548 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.56□□□□□ -2
ERFP50548 RNU6-932P-201ENST00000391108 106 ntBASIC2.56□□□□□ -2
ERFP50548 U3.29-201ENST00000391296 212 ntBASIC2.56□□□□□ -2
ERFP50548 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.56□□□□□ -2
ERFP50548 USP9YP19-201ENST00000412165 485 ntBASIC2.56□□□□□ -2
ERFP50548 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
ERFP50548 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.56□□□□□ -2
ERFP50548 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms