Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.99□□□□□ -2.09
CENPFP49454 UBE2L2-201ENST00000254302 429 ntBASIC1.99□□□□□ -2.09
CENPFP49454 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.99□□□□□ -2.09
CENPFP49454 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.99□□□□□ -2.09
CENPFP49454 AL627309.6-201ENST00000606857 840 ntBASIC1.99□□□□□ -2.09
CENPFP49454 VN1R7P-201ENST00000619242 903 ntBASIC1.99□□□□□ -2.09
CENPFP49454 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.99□□□□□ -2.09
CENPFP49454 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CENPFP49454 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CENPFP49454 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CENPFP49454 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.98□□□□□ -2.09
CENPFP49454 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.98□□□□□ -2.09
CENPFP49454 MIR7973-1-201ENST00000614683 76 ntBASIC1.98□□□□□ -2.09
CENPFP49454 AC093010.3-201ENST00000570269 15214 ntBASIC1.98□□□□□ -2.09
CENPFP49454 MTCYBP17-201ENST00000503579 789 ntBASIC1.98□□□□□ -2.09
CENPFP49454 USP9YP5-201ENST00000511770 630 ntBASIC1.98□□□□□ -2.09
CENPFP49454 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.98□□□□□ -2.09
CENPFP49454 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.98□□□□□ -2.09
CENPFP49454 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.98□□□□□ -2.09
CENPFP49454 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CENPFP49454 MTCO3P31-201ENST00000405526 789 ntBASIC1.98□□□□□ -2.09
CENPFP49454 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.98□□□□□ -2.09
CENPFP49454 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.98□□□□□ -2.09
CENPFP49454 AC093767.1-201ENST00000504523 156 ntBASIC1.98□□□□□ -2.09
CENPFP49454 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.98□□□□□ -2.09
CENPFP49454 OR10AB1P-201ENST00000609613 938 ntBASIC1.98□□□□□ -2.09
CENPFP49454 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.98□□□□□ -2.09
CENPFP49454 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CENPFP49454 MIR6073-201ENST00000352083 89 ntBASIC1.97□□□□□ -2.09
CENPFP49454 AP000705.1-201ENST00000454567 350 ntBASIC1.97□□□□□ -2.09
CENPFP49454 RPL23AP55-201ENST00000498163 452 ntBASIC1.97□□□□□ -2.09
CENPFP49454 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
CENPFP49454 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.97□□□□□ -2.09
CENPFP49454 MYL12BP1-201ENST00000569826 507 ntBASIC1.97□□□□□ -2.09
CENPFP49454 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CENPFP49454 Z99714.1-201ENST00000450463 807 ntBASIC1.97□□□□□ -2.09
CENPFP49454 AC109464.2-201ENST00000510242 943 ntBASIC1.97□□□□□ -2.09
CENPFP49454 AC136443.5-201ENST00000603741 370 ntBASIC1.97□□□□□ -2.09
CENPFP49454 MTCO1P4-201ENST00000520516 1409 ntBASIC1.97□□□□□ -2.09
CENPFP49454 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CENPFP49454 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
CENPFP49454 U3.37-201ENST00000408528 213 ntBASIC1.96□□□□□ -2.09
CENPFP49454 TPMTP3-201ENST00000411928 735 ntBASIC1.96□□□□□ -2.09
CENPFP49454 AC073136.2-201ENST00000417282 849 ntBASIC1.96□□□□□ -2.09
CENPFP49454 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.96□□□□□ -2.09
CENPFP49454 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.96□□□□□ -2.09
CENPFP49454 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.96□□□□□ -2.09
CENPFP49454 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.96□□□□□ -2.09
CENPFP49454 RPS15AP36-201ENST00000492022 382 ntBASIC1.96□□□□□ -2.09
CENPFP49454 AC103987.3-201ENST00000582071 292 ntBASIC1.96□□□□□ -2.09
CENPFP49454 AC010297.1-201ENST00000623948 149 ntBASIC1.96□□□□□ -2.09
CENPFP49454 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CENPFP49454 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
CENPFP49454 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
CENPFP49454 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CENPFP49454 Y_RNA.251-201ENST00000364551 99 ntBASIC1.96□□□□□ -2.1
CENPFP49454 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.96□□□□□ -2.1
CENPFP49454 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.96□□□□□ -2.1
CENPFP49454 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.96□□□□□ -2.1
CENPFP49454 AP001804.3-201ENST00000525146 880 ntBASIC1.96□□□□□ -2.1
CENPFP49454 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.96□□□□□ -2.1
CENPFP49454 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CENPFP49454 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CENPFP49454 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CENPFP49454 TAS2R15P-201ENST00000390674 928 ntBASIC1.96□□□□□ -2.1
CENPFP49454 PAICSP7-201ENST00000419829 962 ntBASIC1.96□□□□□ -2.1
CENPFP49454 KATNBL1P3-201ENST00000443475 909 ntBASIC1.96□□□□□ -2.1
CENPFP49454 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.96□□□□□ -2.1
CENPFP49454 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.96□□□□□ -2.1
CENPFP49454 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CENPFP49454 SEPT7P7-201ENST00000420492 1301 ntBASIC1.96□□□□□ -2.1
CENPFP49454 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CENPFP49454 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.95□□□□□ -2.1
CENPFP49454 CALM1P2-201ENST00000452941 448 ntBASIC1.95□□□□□ -2.1
CENPFP49454 FAM92A1P1-201ENST00000528023 890 ntBASIC1.95□□□□□ -2.1
CENPFP49454 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.95□□□□□ -2.1
CENPFP49454 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.95□□□□□ -2.1
CENPFP49454 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.95□□□□□ -2.1
CENPFP49454 TRIM60P13-201ENST00000432350 1283 ntBASIC1.95□□□□□ -2.1
CENPFP49454 AL138787.1-202ENST00000437804 898 ntBASIC1.95□□□□□ -2.1
CENPFP49454 AC016957.1-201ENST00000534895 309 ntBASIC1.95□□□□□ -2.1
CENPFP49454 AGGF1P8-201ENST00000562979 1000 ntBASIC1.95□□□□□ -2.1
CENPFP49454 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
CENPFP49454 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CENPFP49454 RNA5SP38-201ENST00000410750 119 ntBASIC1.95□□□□□ -2.1
CENPFP49454 AC107393.1-201ENST00000512403 346 ntBASIC1.95□□□□□ -2.1
CENPFP49454 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.95□□□□□ -2.1
CENPFP49454 AP005137.2-201ENST00000609238 400 ntBASIC1.95□□□□□ -2.1
CENPFP49454 CKAP2P1-201ENST00000555477 2049 ntBASIC1.94□□□□□ -2.1
CENPFP49454 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.94□□□□□ -2.1
CENPFP49454 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.94□□□□□ -2.1
CENPFP49454 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.94□□□□□ -2.1
CENPFP49454 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.94□□□□□ -2.1
CENPFP49454 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.94□□□□□ -2.1
CENPFP49454 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.94□□□□□ -2.1
CENPFP49454 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.94□□□□□ -2.1
CENPFP49454 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.94□□□□□ -2.1
CENPFP49454 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CENPFP49454 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.94□□□□□ -2.1
CENPFP49454 XKRY2-201ENST00000442362 1093 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms