Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MTCO3P2-201ENST00000457365 171 ntBASIC3.15□□□□□ -1.91
SSR1P43307 RPS20P24-201ENST00000457473 361 ntBASIC3.15□□□□□ -1.91
SSR1P43307 RPL23AP11-201ENST00000475260 469 ntBASIC3.15□□□□□ -1.91
SSR1P43307 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSR1P43307 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSR1P43307 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSR1P43307 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.15□□□□□ -1.91
SSR1P43307 CBX3P3-201ENST00000508108 532 ntBASIC3.15□□□□□ -1.91
SSR1P43307 AC008628.1-201ENST00000508663 265 ntBASIC3.15□□□□□ -1.91
SSR1P43307 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.15□□□□□ -1.91
SSR1P43307 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSR1P43307 SNORA48.10-201ENST00000516965 160 ntBASIC3.15□□□□□ -1.91
SSR1P43307 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.15□□□□□ -1.91
SSR1P43307 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.15□□□□□ -1.91
SSR1P43307 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.15□□□□□ -1.91
SSR1P43307 OR4R1P-201ENST00000529879 463 ntBASIC3.15□□□□□ -1.91
SSR1P43307 ZNF705CP-201ENST00000530515 889 ntBASIC3.15□□□□□ -1.91
SSR1P43307 AP001317.1-201ENST00000531194 960 ntBASIC3.15□□□□□ -1.91
SSR1P43307 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.15□□□□□ -1.91
SSR1P43307 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.15□□□□□ -1.91
SSR1P43307 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.15□□□□□ -1.91
SSR1P43307 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.15□□□□□ -1.91
SSR1P43307 AC044913.1-201ENST00000557200 430 ntBASIC3.15□□□□□ -1.91
SSR1P43307 AC093510.2-201ENST00000562820 896 ntBASIC3.15□□□□□ -1.91
SSR1P43307 AC124283.4-201ENST00000581815 456 ntBASIC3.15□□□□□ -1.91
SSR1P43307 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSR1P43307 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.15□□□□□ -1.91
SSR1P43307 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.15□□□□□ -1.91
SSR1P43307 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.15□□□□□ -1.91
SSR1P43307 AC092954.1-201ENST00000609121 445 ntBASIC3.15□□□□□ -1.91
SSR1P43307 AC245517.5-201ENST00000611529 162 ntBASIC3.15□□□□□ -1.91
SSR1P43307 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.15□□□□□ -1.91
SSR1P43307 AL355810.1-201ENST00000614629 552 ntBASIC3.15□□□□□ -1.91
SSR1P43307 AL360181.4-201ENST00000621752 134 ntBASIC3.15□□□□□ -1.91
SSR1P43307 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.15□□□□□ -1.91
SSR1P43307 MIR622-201ENST00000638396 96 ntBASIC3.15□□□□□ -1.91
SSR1P43307 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SSR1P43307 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.15□□□□□ -1.91
SSR1P43307 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.14□□□□□ -1.91
SSR1P43307 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSR1P43307 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SSR1P43307 RNU6-839P-201ENST00000363347 108 ntBASIC3.14□□□□□ -1.91
SSR1P43307 SNORA38.1-201ENST00000364172 131 ntBASIC3.14□□□□□ -1.91
SSR1P43307 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSR1P43307 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.14□□□□□ -1.91
SSR1P43307 RNU6-1074P-201ENST00000383995 104 ntBASIC3.14□□□□□ -1.91
SSR1P43307 U3.42-201ENST00000408746 214 ntBASIC3.14□□□□□ -1.91
SSR1P43307 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.14□□□□□ -1.91
SSR1P43307 AC027644.1-201ENST00000419595 298 ntBASIC3.14□□□□□ -1.91
SSR1P43307 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.14□□□□□ -1.91
SSR1P43307 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.14□□□□□ -1.91
SSR1P43307 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.14□□□□□ -1.91
SSR1P43307 AP000705.1-201ENST00000454567 350 ntBASIC3.14□□□□□ -1.91
SSR1P43307 TRBV26-201ENST00000456572 344 ntBASIC3.14□□□□□ -1.91
SSR1P43307 RPL21P41-201ENST00000459863 264 ntBASIC3.14□□□□□ -1.91
SSR1P43307 DYNLL1P6-201ENST00000503440 264 ntBASIC3.14□□□□□ -1.91
SSR1P43307 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSR1P43307 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.14□□□□□ -1.91
SSR1P43307 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSR1P43307 RNA5SP135-201ENST00000517019 125 ntBASIC3.14□□□□□ -1.91
SSR1P43307 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.14□□□□□ -1.91
SSR1P43307 AC009812.2-201ENST00000517657 457 ntBASIC3.14□□□□□ -1.91
SSR1P43307 MTCO1P47-201ENST00000523889 1271 ntBASIC3.14□□□□□ -1.91
SSR1P43307 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.14□□□□□ -1.91
SSR1P43307 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.14□□□□□ -1.91
SSR1P43307 SNRPGP16-201ENST00000533275 226 ntBASIC3.14□□□□□ -1.91
SSR1P43307 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.14□□□□□ -1.91
SSR1P43307 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.14□□□□□ -1.91
SSR1P43307 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.14□□□□□ -1.91
SSR1P43307 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.14□□□□□ -1.91
SSR1P43307 AC091925.2-201ENST00000625059 256 ntBASIC3.14□□□□□ -1.91
SSR1P43307 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.14□□□□□ -1.91
SSR1P43307 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
SSR1P43307 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSR1P43307 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.14□□□□□ -1.91
SSR1P43307 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SSR1P43307 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.13□□□□□ -1.91
SSR1P43307 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSR1P43307 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SSR1P43307 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SSR1P43307 OR5H2-201ENST00000355273 945 ntBASIC3.13□□□□□ -1.91
SSR1P43307 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SSR1P43307 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.13□□□□□ -1.91
SSR1P43307 RNU6-468P-201ENST00000384003 109 ntBASIC3.13□□□□□ -1.91
SSR1P43307 MIR217-201ENST00000384817 110 ntBASIC3.13□□□□□ -1.91
SSR1P43307 AL121978.1-201ENST00000402778 359 ntBASIC3.13□□□□□ -1.91
SSR1P43307 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.13□□□□□ -1.91
SSR1P43307 AC092634.6-201ENST00000418558 192 ntBASIC3.13□□□□□ -1.91
SSR1P43307 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.13□□□□□ -1.91
SSR1P43307 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.13□□□□□ -1.91
SSR1P43307 RPL23AP16-201ENST00000441715 421 ntBASIC3.13□□□□□ -1.91
SSR1P43307 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.13□□□□□ -1.91
SSR1P43307 AC004022.1-201ENST00000447766 1066 ntBASIC3.13□□□□□ -1.91
SSR1P43307 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.13□□□□□ -1.91
SSR1P43307 AL034418.1-201ENST00000448675 860 ntBASIC3.13□□□□□ -1.91
SSR1P43307 AC073901.1-201ENST00000462471 408 ntBASIC3.13□□□□□ -1.91
SSR1P43307 RPS29P2-201ENST00000479278 136 ntBASIC3.13□□□□□ -1.91
SSR1P43307 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.13□□□□□ -1.91
SSR1P43307 OR4G11P-201ENST00000492842 939 ntBASIC3.13□□□□□ -1.91
SSR1P43307 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms