Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.93□□□□□ -2.1
HTTP42858 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.93□□□□□ -2.1
HTTP42858 AC004486.1-201ENST00000546846 233 ntBASIC1.93□□□□□ -2.1
HTTP42858 AL133216.2-202ENST00000634512 349 ntBASIC1.93□□□□□ -2.1
HTTP42858 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.93□□□□□ -2.1
HTTP42858 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
HTTP42858 RNA5SP160-201ENST00000364866 120 ntBASIC1.92□□□□□ -2.1
HTTP42858 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.92□□□□□ -2.1
HTTP42858 XKRY2-201ENST00000442362 1093 ntBASIC1.92□□□□□ -2.1
HTTP42858 Z99714.1-201ENST00000450463 807 ntBASIC1.92□□□□□ -2.1
HTTP42858 snoU109.4-201ENST00000458953 143 ntBASIC1.92□□□□□ -2.1
HTTP42858 AC009314.1-201ENST00000603871 304 ntBASIC1.92□□□□□ -2.1
HTTP42858 AC006378.2-201ENST00000623178 2476 ntBASIC1.92□□□□□ -2.1
HTTP42858 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HTTP42858 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
HTTP42858 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HTTP42858 MIR598-201ENST00000384868 97 ntBASIC1.92□□□□□ -2.1
HTTP42858 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.92□□□□□ -2.1
HTTP42858 AC012498.1-201ENST00000424037 437 ntBASIC1.92□□□□□ -2.1
HTTP42858 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.92□□□□□ -2.1
HTTP42858 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC1.92□□□□□ -2.1
HTTP42858 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.92□□□□□ -2.1
HTTP42858 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.92□□□□□ -2.1
HTTP42858 AC098848.2-201ENST00000588023 330 ntBASIC1.92□□□□□ -2.1
HTTP42858 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.92□□□□□ -2.1
HTTP42858 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
HTTP42858 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
HTTP42858 MTND4P23-201ENST00000447723 1363 ntBASIC1.91□□□□□ -2.1
HTTP42858 AC005336.3-201ENST00000623833 2679 ntBASIC1.91□□□□□ -2.1
HTTP42858 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.91□□□□□ -2.1
HTTP42858 ATP5EP1-201ENST00000510257 156 ntBASIC1.91□□□□□ -2.1
HTTP42858 RPS3AP23-202ENST00000574601 686 ntBASIC1.91□□□□□ -2.1
HTTP42858 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.91□□□□□ -2.1
HTTP42858 LRRC77P-213ENST00000637727 880 ntBASIC1.91□□□□□ -2.1
HTTP42858 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
HTTP42858 MTCO1P7-201ENST00000419523 1542 ntBASIC1.91□□□□□ -2.1
HTTP42858 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HTTP42858 RNU2-32P-201ENST00000411193 191 ntBASIC1.91□□□□□ -2.1
HTTP42858 AC244505.5-201ENST00000443639 207 ntBASIC1.91□□□□□ -2.1
HTTP42858 AC079804.2-201ENST00000490376 200 ntBASIC1.91□□□□□ -2.1
HTTP42858 RNA5SP476-201ENST00000516613 103 ntBASIC1.91□□□□□ -2.1
HTTP42858 AP005660.1-201ENST00000522972 293 ntBASIC1.91□□□□□ -2.1
HTTP42858 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.91□□□□□ -2.1
HTTP42858 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HTTP42858 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HTTP42858 RNA5SP502-201ENST00000362694 119 ntBASIC1.91□□□□□ -2.1
HTTP42858 AC129850.1-201ENST00000436203 508 ntBASIC1.91□□□□□ -2.1
HTTP42858 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.91□□□□□ -2.1
HTTP42858 RPL23AP55-201ENST00000498163 452 ntBASIC1.91□□□□□ -2.1
HTTP42858 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.91□□□□□ -2.1
HTTP42858 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.91□□□□□ -2.1
HTTP42858 AP001148.1-201ENST00000624124 2359 ntBASIC1.9□□□□□ -2.1
HTTP42858 MTND5P12-201ENST00000502851 1449 ntBASIC1.9□□□□□ -2.1
HTTP42858 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
HTTP42858 MIR1323-201ENST00000408090 73 ntBASIC1.9□□□□□ -2.11
HTTP42858 MTND3P6-201ENST00000485242 339 ntBASIC1.9□□□□□ -2.11
HTTP42858 AC109464.2-201ENST00000510242 943 ntBASIC1.9□□□□□ -2.11
HTTP42858 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.9□□□□□ -2.11
HTTP42858 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
HTTP42858 AC017099.1-201ENST00000448261 1028 ntBASIC1.9□□□□□ -2.11
HTTP42858 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.9□□□□□ -2.11
HTTP42858 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HTTP42858 AL356575.1-201ENST00000603008 283 ntBASIC1.9□□□□□ -2.11
HTTP42858 AL049840.6-202ENST00000603373 279 ntBASIC1.9□□□□□ -2.11
HTTP42858 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HTTP42858 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.9□□□□□ -2.11
HTTP42858 MTCO1P4-201ENST00000520516 1409 ntBASIC1.89□□□□□ -2.11
HTTP42858 MIR708-201ENST00000390708 88 ntBASIC1.89□□□□□ -2.11
HTTP42858 RNA5SP338-201ENST00000410495 85 ntBASIC1.89□□□□□ -2.11
HTTP42858 TRIM60P13-201ENST00000432350 1283 ntBASIC1.89□□□□□ -2.11
HTTP42858 AC025033.1-201ENST00000463883 194 ntBASIC1.89□□□□□ -2.11
HTTP42858 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
HTTP42858 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.89□□□□□ -2.11
HTTP42858 VN1R74P-201ENST00000613259 503 ntBASIC1.89□□□□□ -2.11
HTTP42858 AL021368.2-201ENST00000606125 5352 ntBASIC1.89□□□□□ -2.11
HTTP42858 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
HTTP42858 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HTTP42858 RNU1-93P-201ENST00000364704 169 ntBASIC1.89□□□□□ -2.11
HTTP42858 RNU6-60P-201ENST00000364792 103 ntBASIC1.89□□□□□ -2.11
HTTP42858 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.89□□□□□ -2.11
HTTP42858 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.89□□□□□ -2.11
HTTP42858 AC091515.1-201ENST00000548110 679 ntBASIC1.89□□□□□ -2.11
HTTP42858 AL008729.2-201ENST00000606393 473 ntBASIC1.89□□□□□ -2.11
HTTP42858 AC245100.2-201ENST00000454544 1679 ntBASIC1.89□□□□□ -2.11
HTTP42858 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HTTP42858 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.88□□□□□ -2.11
HTTP42858 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.88□□□□□ -2.11
HTTP42858 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.88□□□□□ -2.11
HTTP42858 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.88□□□□□ -2.11
HTTP42858 AC022634.1-201ENST00000520765 532 ntBASIC1.88□□□□□ -2.11
HTTP42858 AC010297.1-201ENST00000623948 149 ntBASIC1.88□□□□□ -2.11
HTTP42858 Y_RNA.251-201ENST00000364551 99 ntBASIC1.88□□□□□ -2.11
HTTP42858 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.88□□□□□ -2.11
HTTP42858 RPL23AP7-203ENST00000449021 469 ntBASIC1.88□□□□□ -2.11
HTTP42858 RNU6-717P-201ENST00000459076 104 ntBASIC1.88□□□□□ -2.11
HTTP42858 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.88□□□□□ -2.11
HTTP42858 AP001804.3-201ENST00000525146 880 ntBASIC1.88□□□□□ -2.11
HTTP42858 MYL12BP1-201ENST00000569826 507 ntBASIC1.88□□□□□ -2.11
HTTP42858 AC060766.3-201ENST00000591442 263 ntBASIC1.88□□□□□ -2.11
HTTP42858 OR10AB1P-201ENST00000609613 938 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms