Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CR769767.1-201ENST00000436337 346 ntBASIC2.34□□□□□ -2.03
COL4A5P29400 SDR42E1P3-201ENST00000438345 502 ntBASIC2.34□□□□□ -2.03
COL4A5P29400 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.34□□□□□ -2.03
COL4A5P29400 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.34□□□□□ -2.03
COL4A5P29400 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.34□□□□□ -2.03
COL4A5P29400 TBCAP3-201ENST00000512475 312 ntBASIC2.34□□□□□ -2.03
COL4A5P29400 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.34□□□□□ -2.03
COL4A5P29400 RNA5SP182-201ENST00000516064 82 ntBASIC2.34□□□□□ -2.03
COL4A5P29400 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.34□□□□□ -2.03
COL4A5P29400 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
COL4A5P29400 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.34□□□□□ -2.03
COL4A5P29400 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.34□□□□□ -2.03
COL4A5P29400 AC005021.1-201ENST00000608730 355 ntBASIC2.34□□□□□ -2.03
COL4A5P29400 AC011472.4-201ENST00000615848 491 ntBASIC2.34□□□□□ -2.03
COL4A5P29400 AC084768.2-201ENST00000622736 221 ntBASIC2.34□□□□□ -2.03
COL4A5P29400 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
COL4A5P29400 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
COL4A5P29400 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.34□□□□□ -2.04
COL4A5P29400 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
COL4A5P29400 Y_RNA.224-201ENST00000364308 111 ntBASIC2.34□□□□□ -2.04
COL4A5P29400 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.34□□□□□ -2.04
COL4A5P29400 AL138785.1-201ENST00000425821 331 ntBASIC2.34□□□□□ -2.04
COL4A5P29400 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.34□□□□□ -2.04
COL4A5P29400 RPL5P13-201ENST00000462840 709 ntBASIC2.34□□□□□ -2.04
COL4A5P29400 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.34□□□□□ -2.04
COL4A5P29400 SNORA70.14-201ENST00000516205 110 ntBASIC2.34□□□□□ -2.04
COL4A5P29400 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.34□□□□□ -2.04
COL4A5P29400 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.34□□□□□ -2.04
COL4A5P29400 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.34□□□□□ -2.04
COL4A5P29400 RN7SL622P-201ENST00000585292 275 ntBASIC2.34□□□□□ -2.04
COL4A5P29400 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
COL4A5P29400 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.34□□□□□ -2.04
COL4A5P29400 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.34□□□□□ -2.04
COL4A5P29400 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL4A5P29400 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL4A5P29400 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
COL4A5P29400 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.33□□□□□ -2.04
COL4A5P29400 AC013404.1-201ENST00000413068 249 ntBASIC2.33□□□□□ -2.04
COL4A5P29400 AC027124.2-201ENST00000428249 105 ntBASIC2.33□□□□□ -2.04
COL4A5P29400 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.33□□□□□ -2.04
COL4A5P29400 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.33□□□□□ -2.04
COL4A5P29400 MTATP6P22-201ENST00000507369 598 ntBASIC2.33□□□□□ -2.04
COL4A5P29400 EIF4EP5-201ENST00000528228 640 ntBASIC2.33□□□□□ -2.04
COL4A5P29400 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.33□□□□□ -2.04
COL4A5P29400 MTCO3P13-201ENST00000577757 781 ntBASIC2.33□□□□□ -2.04
COL4A5P29400 FAM60CP-201ENST00000591086 664 ntBASIC2.33□□□□□ -2.04
COL4A5P29400 AC020895.1-201ENST00000595362 272 ntBASIC2.33□□□□□ -2.04
COL4A5P29400 ABI1P1-201ENST00000603375 1120 ntBASIC2.33□□□□□ -2.04
COL4A5P29400 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.33□□□□□ -2.04
COL4A5P29400 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL4A5P29400 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.32□□□□□ -2.04
COL4A5P29400 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL4A5P29400 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
COL4A5P29400 SNORA51.11-201ENST00000384442 131 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 USP9YP6-201ENST00000413550 854 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 RPL30P3-201ENST00000424262 333 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 SAR1AP4-201ENST00000429225 591 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 ATP5F1P1-201ENST00000433775 569 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.32□□□□□ -2.04
COL4A5P29400 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.32□□□□□ -2.04
COL4A5P29400 CBWD4P-201ENST00000445695 655 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 NDUFS5P3-201ENST00000450668 321 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 USP9YP34-201ENST00000453983 808 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.32□□□□□ -2.04
COL4A5P29400 AC092436.3-201ENST00000511788 257 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.32□□□□□ -2.04
COL4A5P29400 AC083899.3-201ENST00000603413 594 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.32□□□□□ -2.04
COL4A5P29400 MIR6779-201ENST00000617283 64 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 uc_338.9-201ENST00000617424 182 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 AC091046.2-201ENST00000620775 665 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 C2orf27A-204ENST00000623058 969 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
COL4A5P29400 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
COL4A5P29400 EXOC5P1-201ENST00000510543 1969 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 MTCO1P14-201ENST00000441695 1559 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 AC244517.1-201ENST00000606030 2086 ntBASIC2.32□□□□□ -2.04
COL4A5P29400 U3.15-201ENST00000365398 212 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 RNU4-31P-201ENST00000384211 141 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 AC092832.1-201ENST00000422934 400 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.31□□□□□ -2.04
COL4A5P29400 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.31□□□□□ -2.04
COL4A5P29400 NAMPTP2-201ENST00000505629 1115 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 RNA5SP385-201ENST00000515947 110 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 AC025857.1-201ENST00000525252 377 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
COL4A5P29400 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.31□□□□□ -2.04
COL4A5P29400 OR6C73P-201ENST00000546432 358 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 NF1P5-201ENST00000588287 448 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 AL627309.6-201ENST00000606857 840 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 AC139769.3-201ENST00000618383 175 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 AC106730.3-201ENST00000624568 641 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 RNF6P1-201ENST00000444889 1784 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL4A5P29400 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL4A5P29400 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
COL4A5P29400 DCAF13P1-201ENST00000495256 1330 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
COL4A5P29400 Y_RNA.112-201ENST00000363250 102 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 MIR320B1-201ENST00000390209 79 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms