Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.16□□□□□ -1.9
PTPN6P29350 ATP5C1P1-201ENST00000441945 895 ntBASIC3.16□□□□□ -1.9
PTPN6P29350 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN6P29350 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN6P29350 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN6P29350 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN6P29350 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN6P29350 AC111000.2-201ENST00000507775 550 ntBASIC3.16□□□□□ -1.9
PTPN6P29350 XKRY-201ENST00000510392 1100 ntBASIC3.16□□□□□ -1.9
PTPN6P29350 SNORA64.4-201ENST00000516632 81 ntBASIC3.16□□□□□ -1.9
PTPN6P29350 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN6P29350 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN6P29350 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN6P29350 UBE2NP1-201ENST00000545592 458 ntBASIC3.16□□□□□ -1.9
PTPN6P29350 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN6P29350 CR383656.7-201ENST00000548164 174 ntBASIC3.16□□□□□ -1.9
PTPN6P29350 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN6P29350 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN6P29350 AC096577.2-201ENST00000611455 153 ntBASIC3.16□□□□□ -1.9
PTPN6P29350 AL138880.2-201ENST00000616214 239 ntBASIC3.16□□□□□ -1.9
PTPN6P29350 AL355365.1-201ENST00000616480 294 ntBASIC3.16□□□□□ -1.9
PTPN6P29350 MIR7975-201ENST00000619350 68 ntBASIC3.16□□□□□ -1.9
PTPN6P29350 AL353748.2-201ENST00000622148 471 ntBASIC3.16□□□□□ -1.9
PTPN6P29350 CRYM-AS1-204ENST00000637983 556 ntBASIC3.16□□□□□ -1.9
PTPN6P29350 AL356473.1-201ENST00000406203 1408 ntBASIC3.16□□□□□ -1.9
PTPN6P29350 AC004972.1-201ENST00000623934 2209 ntBASIC3.16□□□□□ -1.9
PTPN6P29350 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN6P29350 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN6P29350 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN6P29350 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.9
PTPN6P29350 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.15□□□□□ -1.9
PTPN6P29350 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTPN6P29350 RNU6-1155P-201ENST00000363554 107 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 RPS4XP3-201ENST00000398541 413 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 DHFRP6-201ENST00000401776 268 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 AL136372.1-201ENST00000403060 228 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN6P29350 AL356320.2-201ENST00000417263 507 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 TIMM9P2-201ENST00000419324 266 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.15□□□□□ -1.91
PTPN6P29350 TMEM167AP1-201ENST00000423409 219 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 AC007742.1-201ENST00000425789 329 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 ELOCP26-201ENST00000436067 329 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.15□□□□□ -1.91
PTPN6P29350 AL645638.1-201ENST00000440519 361 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 AL590664.1-201ENST00000448065 339 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 AC104978.1-201ENST00000449387 391 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PTPN6P29350 ZNF886P-201ENST00000450781 723 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 RPL26P28-201ENST00000451325 435 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN6P29350 RPL18AP17-201ENST00000455326 198 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 RPL30P14-201ENST00000482744 348 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 RPL32P34-201ENST00000486380 400 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 WBP1LP4-201ENST00000505043 344 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN6P29350 IGKV2-26-201ENST00000518305 343 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.15□□□□□ -1.91
PTPN6P29350 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN6P29350 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN6P29350 MIR5186-201ENST00000577504 120 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN6P29350 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN6P29350 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN6P29350 AC004987.4-201ENST00000603383 338 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN6P29350 ELOCP35-201ENST00000604289 336 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 SNORD39.4-201ENST00000620099 78 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN6P29350 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.15□□□□□ -1.91
PTPN6P29350 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN6P29350 AL513185.3-201ENST00000433335 1300 ntBASIC3.15□□□□□ -1.91
PTPN6P29350 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTPN6P29350 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTPN6P29350 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PTPN6P29350 MTND5P1-201ENST00000445440 1375 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPN6P29350 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPN6P29350 RNU1-33P-201ENST00000364249 162 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 SNORA14A-201ENST00000364773 135 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PTPN6P29350 AL031679.1-201ENST00000400616 525 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 ERHP2-201ENST00000402323 299 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AL356131.1-201ENST00000405826 414 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AC245291.1-201ENST00000419501 328 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 USP9YP11-201ENST00000427537 717 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AC097713.2-201ENST00000430199 356 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 EZH2P1-201ENST00000431167 291 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 OR6K5P-201ENST00000447050 945 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AC125238.1-201ENST00000448842 249 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AC008155.2-201ENST00000464337 397 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 MTND1P16-201ENST00000465177 898 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 RPL21P13-201ENST00000488305 481 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms