Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.55□□□□□ -2.16
APCP25054 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.55□□□□□ -2.16
APCP25054 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.55□□□□□ -2.16
APCP25054 PSMA6P4-201ENST00000603247 718 ntBASIC1.55□□□□□ -2.16
APCP25054 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.54□□□□□ -2.16
APCP25054 MIR598-201ENST00000384868 97 ntBASIC1.54□□□□□ -2.16
APCP25054 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
APCP25054 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.54□□□□□ -2.16
APCP25054 HAR1A.1-201ENST00000459583 118 ntBASIC1.54□□□□□ -2.16
APCP25054 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.54□□□□□ -2.16
APCP25054 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.54□□□□□ -2.16
APCP25054 GZMAP1-201ENST00000503054 631 ntBASIC1.54□□□□□ -2.16
APCP25054 AL389895.1-201ENST00000554127 252 ntBASIC1.54□□□□□ -2.16
APCP25054 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.54□□□□□ -2.16
APCP25054 HPVC1-201ENST00000629899 1198 ntBASIC1.54□□□□□ -2.16
APCP25054 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
APCP25054 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
APCP25054 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
APCP25054 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
APCP25054 SNORD6-201ENST00000365444 73 ntBASIC1.54□□□□□ -2.16
APCP25054 RNU2-20P-201ENST00000410425 191 ntBASIC1.54□□□□□ -2.16
APCP25054 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.54□□□□□ -2.16
APCP25054 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.54□□□□□ -2.16
APCP25054 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.54□□□□□ -2.16
APCP25054 IGKV2D-36-201ENST00000518643 226 ntBASIC1.54□□□□□ -2.16
APCP25054 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.54□□□□□ -2.16
APCP25054 MIR3186-201ENST00000577404 85 ntBASIC1.54□□□□□ -2.16
APCP25054 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.54□□□□□ -2.16
APCP25054 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
APCP25054 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
APCP25054 RNU6-1027P-201ENST00000383998 107 ntBASIC1.53□□□□□ -2.16
APCP25054 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
APCP25054 PIGFP3-201ENST00000441918 722 ntBASIC1.53□□□□□ -2.16
APCP25054 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
APCP25054 AC004486.1-201ENST00000546846 233 ntBASIC1.53□□□□□ -2.16
APCP25054 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.53□□□□□ -2.16
APCP25054 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
APCP25054 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.53□□□□□ -2.16
APCP25054 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
APCP25054 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
APCP25054 SNORD88.1-201ENST00000408684 91 ntBASIC1.53□□□□□ -2.16
APCP25054 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.53□□□□□ -2.16
APCP25054 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
APCP25054 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.53□□□□□ -2.16
APCP25054 AC007536.1-201ENST00000533382 349 ntBASIC1.53□□□□□ -2.16
APCP25054 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.53□□□□□ -2.16
APCP25054 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
APCP25054 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.53□□□□□ -2.17
APCP25054 MIR6073-201ENST00000352083 89 ntBASIC1.53□□□□□ -2.17
APCP25054 MIR548J-201ENST00000408833 112 ntBASIC1.53□□□□□ -2.17
APCP25054 UBE2V1P6-201ENST00000430840 422 ntBASIC1.53□□□□□ -2.17
APCP25054 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.53□□□□□ -2.17
APCP25054 MTND3P6-201ENST00000485242 339 ntBASIC1.53□□□□□ -2.17
APCP25054 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.53□□□□□ -2.17
APCP25054 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.53□□□□□ -2.17
APCP25054 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.53□□□□□ -2.17
APCP25054 AC074140.1-201ENST00000621617 208 ntBASIC1.53□□□□□ -2.17
APCP25054 AL353748.2-201ENST00000622148 471 ntBASIC1.53□□□□□ -2.17
APCP25054 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
APCP25054 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
APCP25054 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
APCP25054 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
APCP25054 MIR96-201ENST00000362288 78 ntBASIC1.52□□□□□ -2.17
APCP25054 Y_RNA.30-201ENST00000362572 97 ntBASIC1.52□□□□□ -2.17
APCP25054 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
APCP25054 MIR625-201ENST00000385047 85 ntBASIC1.52□□□□□ -2.17
APCP25054 ATP5F1P1-201ENST00000433775 569 ntBASIC1.52□□□□□ -2.17
APCP25054 GOLGA5P1-201ENST00000507317 980 ntBASIC1.52□□□□□ -2.17
APCP25054 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.52□□□□□ -2.17
APCP25054 PTP4A1P6-201ENST00000531034 478 ntBASIC1.52□□□□□ -2.17
APCP25054 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.52□□□□□ -2.17
APCP25054 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
APCP25054 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
APCP25054 AC005336.3-201ENST00000623833 2679 ntBASIC1.52□□□□□ -2.17
APCP25054 RNU6-37P-201ENST00000362692 107 ntBASIC1.52□□□□□ -2.17
APCP25054 RNU6-11P-201ENST00000364234 107 ntBASIC1.52□□□□□ -2.17
APCP25054 NCSTNP1-201ENST00000406229 144 ntBASIC1.52□□□□□ -2.17
APCP25054 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.52□□□□□ -2.17
APCP25054 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.52□□□□□ -2.17
APCP25054 AC093767.1-201ENST00000504523 156 ntBASIC1.52□□□□□ -2.17
APCP25054 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.52□□□□□ -2.17
APCP25054 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.52□□□□□ -2.17
APCP25054 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.52□□□□□ -2.17
APCP25054 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.52□□□□□ -2.17
APCP25054 AC067805.1-201ENST00000559344 470 ntBASIC1.52□□□□□ -2.17
APCP25054 OR4G1P-201ENST00000588632 938 ntBASIC1.52□□□□□ -2.17
APCP25054 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.52□□□□□ -2.17
APCP25054 AL627309.6-201ENST00000606857 840 ntBASIC1.52□□□□□ -2.17
APCP25054 AC024560.3-201ENST00000608482 349 ntBASIC1.52□□□□□ -2.17
APCP25054 uc_338.5-201ENST00000611839 155 ntBASIC1.52□□□□□ -2.17
APCP25054 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.52□□□□□ -2.17
APCP25054 AC093775.1-201ENST00000624154 1868 ntBASIC1.51□□□□□ -2.17
APCP25054 RPL23AP20-201ENST00000447965 421 ntBASIC1.51□□□□□ -2.17
APCP25054 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.51□□□□□ -2.17
APCP25054 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
APCP25054 AC087468.1-201ENST00000604365 630 ntBASIC1.51□□□□□ -2.17
APCP25054 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
APCP25054 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.51□□□□□ -2.17
APCP25054 Y_RNA.251-201ENST00000364551 99 ntBASIC1.51□□□□□ -2.17
APCP25054 AC073136.2-201ENST00000417282 849 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms