Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.09□□□□□ -1.92
CFTRP13569 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.09□□□□□ -1.92
CFTRP13569 VIS1.1-201ENST00000610517 203 ntBASIC3.09□□□□□ -1.92
CFTRP13569 uc_338.5-201ENST00000611839 155 ntBASIC3.09□□□□□ -1.92
CFTRP13569 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.09□□□□□ -1.92
CFTRP13569 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CFTRP13569 RPL23AP39-201ENST00000415533 405 ntBASIC3.08□□□□□ -1.92
CFTRP13569 EIF1AXP1-201ENST00000419267 435 ntBASIC3.08□□□□□ -1.92
CFTRP13569 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.08□□□□□ -1.92
CFTRP13569 CLIC4P1-201ENST00000453177 535 ntBASIC3.08□□□□□ -1.92
CFTRP13569 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.08□□□□□ -1.92
CFTRP13569 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.08□□□□□ -1.92
CFTRP13569 RN7SKP5-201ENST00000517045 272 ntBASIC3.08□□□□□ -1.92
CFTRP13569 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.08□□□□□ -1.92
CFTRP13569 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.08□□□□□ -1.92
CFTRP13569 ABI1P1-201ENST00000603375 1120 ntBASIC3.08□□□□□ -1.92
CFTRP13569 AL035411.2-201ENST00000604022 421 ntBASIC3.08□□□□□ -1.92
CFTRP13569 ZNF720P1-201ENST00000562403 1939 ntBASIC3.07□□□□□ -1.92
CFTRP13569 RNA5SP181-201ENST00000410246 98 ntBASIC3.07□□□□□ -1.92
CFTRP13569 RNU4-74P-201ENST00000411280 161 ntBASIC3.07□□□□□ -1.92
CFTRP13569 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.07□□□□□ -1.92
CFTRP13569 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.07□□□□□ -1.92
CFTRP13569 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.07□□□□□ -1.92
CFTRP13569 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CFTRP13569 AC007536.1-201ENST00000533382 349 ntBASIC3.07□□□□□ -1.92
CFTRP13569 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.07□□□□□ -1.92
CFTRP13569 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.07□□□□□ -1.92
CFTRP13569 AP001486.2-201ENST00000561652 5113 ntBASIC3.06□□□□□ -1.92
CFTRP13569 AF274854.1-201ENST00000413236 615 ntBASIC3.06□□□□□ -1.92
CFTRP13569 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.06□□□□□ -1.92
CFTRP13569 AL021397.1-201ENST00000451806 248 ntBASIC3.06□□□□□ -1.92
CFTRP13569 BX322784.1-201ENST00000455793 1077 ntBASIC3.06□□□□□ -1.92
CFTRP13569 AC025033.1-201ENST00000463883 194 ntBASIC3.06□□□□□ -1.92
CFTRP13569 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.06□□□□□ -1.92
CFTRP13569 OR5D17P-201ENST00000531492 978 ntBASIC3.06□□□□□ -1.92
CFTRP13569 AL627309.6-201ENST00000606857 840 ntBASIC3.06□□□□□ -1.92
CFTRP13569 U6.98-201ENST00000637157 84 ntBASIC3.06□□□□□ -1.92
CFTRP13569 AC092447.7-201ENST00000422212 1621 ntBASIC3.06□□□□□ -1.92
CFTRP13569 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
CFTRP13569 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CFTRP13569 AL109809.4-201ENST00000603520 2185 ntBASIC3.06□□□□□ -1.92
CFTRP13569 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
CFTRP13569 RNU6-603P-201ENST00000411403 107 ntBASIC3.05□□□□□ -1.92
CFTRP13569 MTND4LP13-201ENST00000425022 298 ntBASIC3.05□□□□□ -1.92
CFTRP13569 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.05□□□□□ -1.92
CFTRP13569 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.05□□□□□ -1.92
CFTRP13569 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.05□□□□□ -1.92
CFTRP13569 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.05□□□□□ -1.92
CFTRP13569 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.05□□□□□ -1.92
CFTRP13569 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.05□□□□□ -1.92
CFTRP13569 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CFTRP13569 SEPT7P7-201ENST00000420492 1301 ntBASIC3.04□□□□□ -1.92
CFTRP13569 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CFTRP13569 AC004965.1-201ENST00000413033 213 ntBASIC3.04□□□□□ -1.92
CFTRP13569 AC013404.1-201ENST00000413068 249 ntBASIC3.04□□□□□ -1.92
CFTRP13569 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.04□□□□□ -1.92
CFTRP13569 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.04□□□□□ -1.92
CFTRP13569 AL138799.3-201ENST00000438968 350 ntBASIC3.04□□□□□ -1.92
CFTRP13569 USP9YP15-201ENST00000442391 422 ntBASIC3.04□□□□□ -1.92
CFTRP13569 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.04□□□□□ -1.92
CFTRP13569 CASP3P1-201ENST00000446037 609 ntBASIC3.04□□□□□ -1.92
CFTRP13569 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.04□□□□□ -1.92
CFTRP13569 AC079804.2-201ENST00000490376 200 ntBASIC3.04□□□□□ -1.92
CFTRP13569 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.04□□□□□ -1.92
CFTRP13569 TRAV31-201ENST00000502780 342 ntBASIC3.04□□□□□ -1.92
CFTRP13569 MTND5P21-201ENST00000531961 522 ntBASIC3.04□□□□□ -1.92
CFTRP13569 RPS3AP23-202ENST00000574601 686 ntBASIC3.04□□□□□ -1.92
CFTRP13569 AC103810.1-201ENST00000579873 453 ntBASIC3.04□□□□□ -1.92
CFTRP13569 AC123786.2-201ENST00000603459 275 ntBASIC3.04□□□□□ -1.92
CFTRP13569 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CFTRP13569 RNU2-68P-201ENST00000410878 191 ntBASIC3.03□□□□□ -1.92
CFTRP13569 NDUFA5P4-201ENST00000436704 385 ntBASIC3.03□□□□□ -1.92
CFTRP13569 AC109486.1-201ENST00000486833 374 ntBASIC3.03□□□□□ -1.92
CFTRP13569 RNA5SP402-201ENST00000517148 110 ntBASIC3.03□□□□□ -1.92
CFTRP13569 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.03□□□□□ -1.92
CFTRP13569 AL353748.2-201ENST00000622148 471 ntBASIC3.03□□□□□ -1.92
CFTRP13569 AC006378.2-201ENST00000623178 2476 ntBASIC3.03□□□□□ -1.92
CFTRP13569 MTCO1P14-201ENST00000441695 1559 ntBASIC3.03□□□□□ -1.92
CFTRP13569 ELOCP10-201ENST00000440624 327 ntBASIC3.03□□□□□ -1.93
CFTRP13569 RPL7P31-201ENST00000450192 724 ntBASIC3.03□□□□□ -1.93
CFTRP13569 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.03□□□□□ -1.93
CFTRP13569 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.03□□□□□ -1.93
CFTRP13569 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CFTRP13569 ELOCP34-201ENST00000604436 327 ntBASIC3.03□□□□□ -1.93
CFTRP13569 BX248123.2-201ENST00000606318 124 ntBASIC3.03□□□□□ -1.93
CFTRP13569 HPVC1-201ENST00000629899 1198 ntBASIC3.03□□□□□ -1.93
CFTRP13569 AC027514.1-201ENST00000588561 1603 ntBASIC3.02□□□□□ -1.93
CFTRP13569 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.02□□□□□ -1.93
CFTRP13569 MOB1AP2-201ENST00000446060 614 ntBASIC3.02□□□□□ -1.93
CFTRP13569 AC092798.1-201ENST00000458542 409 ntBASIC3.02□□□□□ -1.93
CFTRP13569 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CFTRP13569 AC090751.1-201ENST00000566966 267 ntBASIC3.02□□□□□ -1.93
CFTRP13569 AC103987.3-201ENST00000582071 292 ntBASIC3.02□□□□□ -1.93
CFTRP13569 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
CFTRP13569 AP001542.2-201ENST00000593141 364 ntBASIC3.02□□□□□ -1.93
CFTRP13569 AC090953.1-201ENST00000604305 1092 ntBASIC3.02□□□□□ -1.93
CFTRP13569 AL512598.1-201ENST00000610158 273 ntBASIC3.02□□□□□ -1.93
CFTRP13569 DCAF13P1-201ENST00000495256 1330 ntBASIC3.01□□□□□ -1.93
CFTRP13569 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CFTRP13569 RNA5SP27-201ENST00000363839 119 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms