Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.96□□□□□ -2.1
FREM3P0C091 RSL24D1P2-201ENST00000445584 366 ntBASIC1.96□□□□□ -2.1
FREM3P0C091 AL445669.2-201ENST00000454425 421 ntBASIC1.96□□□□□ -2.1
FREM3P0C091 AC068587.2-201ENST00000478386 781 ntBASIC1.96□□□□□ -2.1
FREM3P0C091 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.96□□□□□ -2.1
FREM3P0C091 AC090543.1-201ENST00000492168 485 ntBASIC1.96□□□□□ -2.1
FREM3P0C091 RPL23AP55-201ENST00000498163 452 ntBASIC1.96□□□□□ -2.1
FREM3P0C091 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.96□□□□□ -2.1
FREM3P0C091 AC117525.1-201ENST00000515228 503 ntBASIC1.96□□□□□ -2.1
FREM3P0C091 Y_RNA.673-201ENST00000516306 88 ntBASIC1.96□□□□□ -2.1
FREM3P0C091 RNU6-1004P-201ENST00000516584 111 ntBASIC1.96□□□□□ -2.1
FREM3P0C091 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.96□□□□□ -2.1
FREM3P0C091 AC074029.1-201ENST00000552531 1044 ntBASIC1.96□□□□□ -2.1
FREM3P0C091 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.96□□□□□ -2.1
FREM3P0C091 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.96□□□□□ -2.1
FREM3P0C091 AL133393.1-201ENST00000603277 287 ntBASIC1.96□□□□□ -2.1
FREM3P0C091 AC113194.1-201ENST00000606037 500 ntBASIC1.96□□□□□ -2.1
FREM3P0C091 MTND4P31-201ENST00000425607 1343 ntBASIC1.95□□□□□ -2.1
FREM3P0C091 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
FREM3P0C091 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.95□□□□□ -2.1
FREM3P0C091 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.95□□□□□ -2.1
FREM3P0C091 TPTE2P6-202ENST00000445572 1007 ntBASIC1.95□□□□□ -2.1
FREM3P0C091 RPL34P26-201ENST00000445636 354 ntBASIC1.95□□□□□ -2.1
FREM3P0C091 HMGB1P48-201ENST00000446155 598 ntBASIC1.95□□□□□ -2.1
FREM3P0C091 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.95□□□□□ -2.1
FREM3P0C091 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.95□□□□□ -2.1
FREM3P0C091 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.95□□□□□ -2.1
FREM3P0C091 HMGN2P16-201ENST00000456802 261 ntBASIC1.95□□□□□ -2.1
FREM3P0C091 NF1P3-201ENST00000457709 450 ntBASIC1.95□□□□□ -2.1
FREM3P0C091 RPS23P3-201ENST00000470993 430 ntBASIC1.95□□□□□ -2.1
FREM3P0C091 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.95□□□□□ -2.1
FREM3P0C091 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.95□□□□□ -2.1
FREM3P0C091 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.95□□□□□ -2.1
FREM3P0C091 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.95□□□□□ -2.1
FREM3P0C091 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.95□□□□□ -2.1
FREM3P0C091 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.95□□□□□ -2.1
FREM3P0C091 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.95□□□□□ -2.1
FREM3P0C091 AC103710.1-201ENST00000610003 901 ntBASIC1.95□□□□□ -2.1
FREM3P0C091 AC004696.1-201ENST00000614345 607 ntBASIC1.95□□□□□ -2.1
FREM3P0C091 AC244517.12-201ENST00000623581 663 ntBASIC1.95□□□□□ -2.1
FREM3P0C091 AC006963.1-201ENST00000624003 1052 ntBASIC1.95□□□□□ -2.1
FREM3P0C091 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
FREM3P0C091 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
FREM3P0C091 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
FREM3P0C091 AL355578.1-201ENST00000607405 1328 ntBASIC1.95□□□□□ -2.1
FREM3P0C091 AL591034.1-201ENST00000407447 340 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 SNORA3.2-201ENST00000408221 125 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 AC104332.2-201ENST00000429959 156 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.94□□□□□ -2.1
FREM3P0C091 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.94□□□□□ -2.1
FREM3P0C091 TRBV26-201ENST00000456572 344 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 SYPL1P1-201ENST00000473622 768 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 HMGN2P13-201ENST00000476476 274 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 NCOR1P1-202ENST00000486162 291 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 SNORA31.26-201ENST00000517250 137 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 EEF1A1P37-201ENST00000522748 715 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 AC019227.1-201ENST00000526902 510 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 AC004923.2-201ENST00000529649 369 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.94□□□□□ -2.1
FREM3P0C091 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.94□□□□□ -2.1
FREM3P0C091 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
FREM3P0C091 AC008962.1-201ENST00000605729 304 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 AC103798.2-201ENST00000624292 632 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.94□□□□□ -2.1
FREM3P0C091 AL049737.1-201ENST00000413920 1403 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
FREM3P0C091 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
FREM3P0C091 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.94□□□□□ -2.1
FREM3P0C091 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.94□□□□□ -2.1
FREM3P0C091 SNORA40.18-201ENST00000391200 128 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 MTATP6P31-201ENST00000406985 692 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.94□□□□□ -2.1
FREM3P0C091 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
FREM3P0C091 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.94□□□□□ -2.1
FREM3P0C091 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.94□□□□□ -2.1
FREM3P0C091 AL035407.2-201ENST00000454090 378 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.94□□□□□ -2.1
FREM3P0C091 RNU6-1073P-201ENST00000517182 106 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 RNU6-711P-201ENST00000517255 106 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.94□□□□□ -2.1
FREM3P0C091 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.94□□□□□ -2.1
FREM3P0C091 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.94□□□□□ -2.1
FREM3P0C091 MIR5002-201ENST00000584713 97 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 AC245517.5-201ENST00000611529 162 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
FREM3P0C091 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.94□□□□□ -2.1
FREM3P0C091 AC241585.2-209ENST00000638217 143 ntBASIC1.94□□□□□ -2.1
FREM3P0C091 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
FREM3P0C091 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
FREM3P0C091 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
FREM3P0C091 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
FREM3P0C091 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
FREM3P0C091 AL121972.1-201ENST00000402023 252 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 AC109780.2-201ENST00000413467 845 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 MRPS33P4-201ENST00000434892 317 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.93□□□□□ -2.1
FREM3P0C091 AC096638.1-201ENST00000444678 216 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.93□□□□□ -2.1
FREM3P0C091 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.93□□□□□ -2.1
FREM3P0C091 AC073901.1-201ENST00000462471 408 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms