Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC093767.1-201ENST00000504523 156 ntBASIC2.89□□□□□ -1.95
TPM1P09493 SNORA31.11-201ENST00000516528 139 ntBASIC2.89□□□□□ -1.95
TPM1P09493 RPPH1-2P-201ENST00000516688 293 ntBASIC2.89□□□□□ -1.95
TPM1P09493 AP003102.1-201ENST00000525638 661 ntBASIC2.89□□□□□ -1.95
TPM1P09493 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.89□□□□□ -1.95
TPM1P09493 CCNG2P1-201ENST00000549521 1000 ntBASIC2.89□□□□□ -1.95
TPM1P09493 CKS1BP1-201ENST00000555221 240 ntBASIC2.89□□□□□ -1.95
TPM1P09493 AC011260.1-201ENST00000578420 472 ntBASIC2.89□□□□□ -1.95
TPM1P09493 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.89□□□□□ -1.95
TPM1P09493 AL020997.3-201ENST00000602843 359 ntBASIC2.89□□□□□ -1.95
TPM1P09493 AP002826.1-201ENST00000608835 315 ntBASIC2.89□□□□□ -1.95
TPM1P09493 AL163051.2-201ENST00000618976 735 ntBASIC2.89□□□□□ -1.95
TPM1P09493 AL512283.1-201ENST00000606756 1384 ntBASIC2.88□□□□□ -1.95
TPM1P09493 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
TPM1P09493 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.88□□□□□ -1.95
TPM1P09493 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
TPM1P09493 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
TPM1P09493 RNA5SP374-201ENST00000362939 125 ntBASIC2.88□□□□□ -1.95
TPM1P09493 AL138827.1-201ENST00000402666 306 ntBASIC2.88□□□□□ -1.95
TPM1P09493 AL133384.1-201ENST00000412744 351 ntBASIC2.88□□□□□ -1.95
TPM1P09493 EEF1A1P41-201ENST00000414667 207 ntBASIC2.88□□□□□ -1.95
TPM1P09493 RPL27AP8-201ENST00000424277 446 ntBASIC2.88□□□□□ -1.95
TPM1P09493 AL355994.1-201ENST00000424379 260 ntBASIC2.88□□□□□ -1.95
TPM1P09493 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.88□□□□□ -1.95
TPM1P09493 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.88□□□□□ -1.95
TPM1P09493 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.88□□□□□ -1.95
TPM1P09493 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.88□□□□□ -1.95
TPM1P09493 AC114878.1-201ENST00000441166 358 ntBASIC2.88□□□□□ -1.95
TPM1P09493 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.88□□□□□ -1.95
TPM1P09493 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TPM1P09493 AC123904.3-201ENST00000547218 814 ntBASIC2.88□□□□□ -1.95
TPM1P09493 AC079089.3-201ENST00000603094 673 ntBASIC2.88□□□□□ -1.95
TPM1P09493 AC016911.1-201ENST00000613297 452 ntBASIC2.88□□□□□ -1.95
TPM1P09493 VN1R7P-201ENST00000619242 903 ntBASIC2.88□□□□□ -1.95
TPM1P09493 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.88□□□□□ -1.95
TPM1P09493 TAB3P1-202ENST00000452645 1634 ntBASIC2.88□□□□□ -1.95
TPM1P09493 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TPM1P09493 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
TPM1P09493 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.88□□□□□ -1.95
TPM1P09493 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.87□□□□□ -1.95
TPM1P09493 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TPM1P09493 AC008669.1-201ENST00000565823 2178 ntBASIC2.87□□□□□ -1.95
TPM1P09493 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TPM1P09493 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
TPM1P09493 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
TPM1P09493 RNU6-796P-201ENST00000391086 107 ntBASIC2.87□□□□□ -1.95
TPM1P09493 ANAPC10P1-201ENST00000395991 556 ntBASIC2.87□□□□□ -1.95
TPM1P09493 ATP5F1P3-201ENST00000397213 657 ntBASIC2.87□□□□□ -1.95
TPM1P09493 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.87□□□□□ -1.95
TPM1P09493 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.87□□□□□ -1.95
TPM1P09493 AL512649.1-201ENST00000428997 581 ntBASIC2.87□□□□□ -1.95
TPM1P09493 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.87□□□□□ -1.95
TPM1P09493 OR51B8P-201ENST00000449892 769 ntBASIC2.87□□□□□ -1.95
TPM1P09493 MTCO3P2-201ENST00000457365 171 ntBASIC2.87□□□□□ -1.95
TPM1P09493 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.87□□□□□ -1.95
TPM1P09493 RPL37P25-201ENST00000507308 276 ntBASIC2.87□□□□□ -1.95
TPM1P09493 SNORA31.21-201ENST00000517180 77 ntBASIC2.87□□□□□ -1.95
TPM1P09493 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.87□□□□□ -1.95
TPM1P09493 AC124293.1-201ENST00000530034 493 ntBASIC2.87□□□□□ -1.95
TPM1P09493 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.87□□□□□ -1.95
TPM1P09493 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.87□□□□□ -1.95
TPM1P09493 AC007954.1-201ENST00000554198 494 ntBASIC2.87□□□□□ -1.95
TPM1P09493 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.87□□□□□ -1.95
TPM1P09493 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.87□□□□□ -1.95
TPM1P09493 BPTFP1-201ENST00000579209 492 ntBASIC2.87□□□□□ -1.95
TPM1P09493 AL022099.1-201ENST00000604551 712 ntBASIC2.87□□□□□ -1.95
TPM1P09493 AL109618.2-201ENST00000605527 211 ntBASIC2.87□□□□□ -1.95
TPM1P09493 YPEL5P2-201ENST00000605553 359 ntBASIC2.87□□□□□ -1.95
TPM1P09493 AL161629.2-201ENST00000615347 275 ntBASIC2.87□□□□□ -1.95
TPM1P09493 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TPM1P09493 AC091925.2-201ENST00000625059 256 ntBASIC2.87□□□□□ -1.95
TPM1P09493 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.87□□□□□ -1.95
TPM1P09493 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
TPM1P09493 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TPM1P09493 MTND5P1-201ENST00000445440 1375 ntBASIC2.87□□□□□ -1.95
TPM1P09493 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.86□□□□□ -1.95
TPM1P09493 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TPM1P09493 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TPM1P09493 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.86□□□□□ -1.95
TPM1P09493 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TPM1P09493 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TPM1P09493 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TPM1P09493 RNA5SP21-201ENST00000410917 96 ntBASIC2.86□□□□□ -1.95
TPM1P09493 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.86□□□□□ -1.95
TPM1P09493 AC234781.2-201ENST00000426370 994 ntBASIC2.86□□□□□ -1.95
TPM1P09493 AC092427.1-202ENST00000430569 476 ntBASIC2.86□□□□□ -1.95
TPM1P09493 VN1R34P-201ENST00000447387 883 ntBASIC2.86□□□□□ -1.95
TPM1P09493 SNORA84-201ENST00000459229 133 ntBASIC2.86□□□□□ -1.95
TPM1P09493 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.86□□□□□ -1.95
TPM1P09493 RNA5SP367-201ENST00000516557 118 ntBASIC2.86□□□□□ -1.95
TPM1P09493 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TPM1P09493 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TPM1P09493 AC067805.1-201ENST00000559344 470 ntBASIC2.86□□□□□ -1.95
TPM1P09493 AC024560.3-201ENST00000608482 349 ntBASIC2.86□□□□□ -1.95
TPM1P09493 AC140725.3-201ENST00000616193 880 ntBASIC2.86□□□□□ -1.95
TPM1P09493 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.86□□□□□ -1.95
TPM1P09493 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.86□□□□□ -1.95
TPM1P09493 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.86□□□□□ -1.95
TPM1P09493 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.86□□□□□ -1.95
TPM1P09493 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms