Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
NPHP4O75161 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPHP4O75161 RNA5SP167-201ENST00000365461 116 ntBASIC3.12□□□□□ -1.91
NPHP4O75161 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.12□□□□□ -1.91
NPHP4O75161 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPHP4O75161 MIR489-201ENST00000384923 84 ntBASIC3.12□□□□□ -1.91
NPHP4O75161 HNRNPDP2-201ENST00000406475 478 ntBASIC3.12□□□□□ -1.91
NPHP4O75161 AL513175.2-201ENST00000422071 443 ntBASIC3.12□□□□□ -1.91
NPHP4O75161 RNU6-775P-201ENST00000459318 96 ntBASIC3.12□□□□□ -1.91
NPHP4O75161 AC111193.1-201ENST00000504097 155 ntBASIC3.12□□□□□ -1.91
NPHP4O75161 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.12□□□□□ -1.91
NPHP4O75161 AC006270.2-201ENST00000578523 652 ntBASIC3.12□□□□□ -1.91
NPHP4O75161 AC023043.3-201ENST00000593113 385 ntBASIC3.12□□□□□ -1.91
NPHP4O75161 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.12□□□□□ -1.91
NPHP4O75161 AL355802.4-201ENST00000607635 548 ntBASIC3.12□□□□□ -1.91
NPHP4O75161 AC004943.3-201ENST00000624116 600 ntBASIC3.12□□□□□ -1.91
NPHP4O75161 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.12□□□□□ -1.91
NPHP4O75161 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPHP4O75161 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPHP4O75161 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
NPHP4O75161 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NPHP4O75161 U8.9-201ENST00000365667 134 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.11□□□□□ -1.91
NPHP4O75161 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.11□□□□□ -1.91
NPHP4O75161 LUZP4P1-201ENST00000415420 344 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 ELOCP6-201ENST00000429066 328 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 AL445646.1-201ENST00000431784 216 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 XKRY2-201ENST00000442362 1093 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 RPS27P5-201ENST00000444247 244 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 COX6CP2-201ENST00000444980 225 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.11□□□□□ -1.91
NPHP4O75161 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.11□□□□□ -1.91
NPHP4O75161 ELOCP12-201ENST00000458706 328 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 AC096992.1-201ENST00000459808 709 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 RNA5SP200-201ENST00000516360 103 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 SNORA31.13-201ENST00000516624 135 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.11□□□□□ -1.91
NPHP4O75161 AC022784.5-201ENST00000522241 437 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 AC004923.2-201ENST00000529649 369 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 ELOCP31-201ENST00000540463 467 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 AC016911.1-201ENST00000613297 452 ntBASIC3.11□□□□□ -1.91
NPHP4O75161 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
NPHP4O75161 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
NPHP4O75161 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.11□□□□□ -1.91
NPHP4O75161 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
NPHP4O75161 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.11□□□□□ -1.91
NPHP4O75161 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPHP4O75161 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NPHP4O75161 SNORD21-201ENST00000383953 95 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.1□□□□□ -1.91
NPHP4O75161 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPHP4O75161 NDUFB4P6-201ENST00000436819 366 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 RPL39P40-201ENST00000445481 146 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 TVP23BP2-201ENST00000455082 615 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.1□□□□□ -1.91
NPHP4O75161 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.1□□□□□ -1.91
NPHP4O75161 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.1□□□□□ -1.91
NPHP4O75161 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.1□□□□□ -1.91
NPHP4O75161 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.1□□□□□ -1.91
NPHP4O75161 CBX3P2-202ENST00000583365 535 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 VN1R80P-201ENST00000597126 338 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.1□□□□□ -1.91
NPHP4O75161 AC002076.2-201ENST00000617362 122 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 AL356266.1-201ENST00000623311 483 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.1□□□□□ -1.91
NPHP4O75161 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.1□□□□□ -1.91
NPHP4O75161 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPHP4O75161 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.1□□□□□ -1.91
NPHP4O75161 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPHP4O75161 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.1□□□□□ -1.91
NPHP4O75161 SNORA25.6-201ENST00000364121 118 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.1□□□□□ -1.91
NPHP4O75161 MIR499A-201ENST00000384903 122 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NPHP4O75161 PRELID3BP11-201ENST00000414230 479 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 AL009174.1-201ENST00000426577 416 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 RPL7P29-201ENST00000437151 728 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.1□□□□□ -1.91
NPHP4O75161 AC011753.1-201ENST00000451001 220 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.1□□□□□ -1.91
NPHP4O75161 RN7SKP82-201ENST00000516786 223 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.1□□□□□ -1.91
NPHP4O75161 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.1□□□□□ -1.91
NPHP4O75161 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.1□□□□□ -1.91
NPHP4O75161 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.1□□□□□ -1.91
NPHP4O75161 AC090751.1-201ENST00000566966 267 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 AL359198.2-201ENST00000611836 194 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 XIST_intron.1-201ENST00000619444 68 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 OR1S1-201ENST00000624470 978 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.1□□□□□ -1.91
NPHP4O75161 MFSD8-245ENST00000641743 948 ntBASIC3.1□□□□□ -1.91
NPHP4O75161 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
NPHP4O75161 RNU6-1293P-201ENST00000384077 107 ntBASIC3.09□□□□□ -1.92
NPHP4O75161 MIR583-201ENST00000384846 75 ntBASIC3.09□□□□□ -1.92
NPHP4O75161 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.09□□□□□ -1.92
NPHP4O75161 LINC01347-201ENST00000417964 355 ntBASIC3.09□□□□□ -1.92
NPHP4O75161 AL590623.1-201ENST00000427864 105 ntBASIC3.09□□□□□ -1.92
NPHP4O75161 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.09□□□□□ -1.92
NPHP4O75161 RPL36AP6-201ENST00000435770 321 ntBASIC3.09□□□□□ -1.92
NPHP4O75161 AC114878.1-201ENST00000441166 358 ntBASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms