Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 uc_338.12-201ENST00000616344 181 ntBASIC5.51□□□□□ -1.53
GRIN3BO60391 AC233309.1-201ENST00000619522 751 ntBASIC5.51□□□□□ -1.53
GRIN3BO60391 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GRIN3BO60391 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GRIN3BO60391 AC004656.1-201ENST00000568479 4951 ntBASIC5.51□□□□□ -1.53
GRIN3BO60391 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GRIN3BO60391 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GRIN3BO60391 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GRIN3BO60391 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
GRIN3BO60391 SOCS5P3-201ENST00000425115 1576 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.5□□□□□ -1.53
GRIN3BO60391 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.5□□□□□ -1.53
GRIN3BO60391 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GRIN3BO60391 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
GRIN3BO60391 RPL7P26-201ENST00000333817 754 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 RNU6-74P-201ENST00000384235 107 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 RNU6-606P-201ENST00000384721 111 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 AL136116.1-201ENST00000403591 381 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 MIR1302-11-201ENST00000408051 138 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 MIR1302-9-201ENST00000408365 138 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 MIR1302-10-201ENST00000408734 138 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 RAB9AP3-201ENST00000412737 573 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 AC009302.1-201ENST00000417147 390 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.5□□□□□ -1.53
GRIN3BO60391 EZH2P1-201ENST00000431167 291 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 AL365400.1-201ENST00000431854 640 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 RPL23AP30-201ENST00000432419 501 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 AC104651.2-201ENST00000447549 528 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 RAB9AP1-201ENST00000449393 573 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.5□□□□□ -1.53
GRIN3BO60391 RNU7-63P-201ENST00000459054 62 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.5□□□□□ -1.53
GRIN3BO60391 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.5□□□□□ -1.53
GRIN3BO60391 PPIAP15-201ENST00000479662 484 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.5□□□□□ -1.53
GRIN3BO60391 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.5□□□□□ -1.53
GRIN3BO60391 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.5□□□□□ -1.53
GRIN3BO60391 AC068993.1-201ENST00000546724 589 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.5□□□□□ -1.53
GRIN3BO60391 AC010928.3-201ENST00000587712 541 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 AC098848.2-201ENST00000588023 330 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 MIR1302-2-201ENST00000607096 138 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 AL050343.2-201ENST00000607338 280 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.5□□□□□ -1.53
GRIN3BO60391 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.5□□□□□ -1.53
GRIN3BO60391 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.5□□□□□ -1.53
GRIN3BO60391 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GRIN3BO60391 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
GRIN3BO60391 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
GRIN3BO60391 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
GRIN3BO60391 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GRIN3BO60391 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GRIN3BO60391 AC006020.1-201ENST00000420179 1854 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 PHKBP1-201ENST00000450951 1951 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.49□□□□□ -1.53
GRIN3BO60391 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GRIN3BO60391 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
GRIN3BO60391 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.49□□□□□ -1.53
GRIN3BO60391 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.49□□□□□ -1.53
GRIN3BO60391 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
GRIN3BO60391 RPL21P67-201ENST00000402896 478 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 RNU2-9P-201ENST00000410194 145 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 RNU6-603P-201ENST00000411403 107 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.49□□□□□ -1.53
GRIN3BO60391 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.49□□□□□ -1.53
GRIN3BO60391 SRIP2-201ENST00000428470 166 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.49□□□□□ -1.53
GRIN3BO60391 UBE2V1P13-201ENST00000436983 439 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 TMEM248P1-201ENST00000510579 951 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 SCARNA24.1-201ENST00000516465 137 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 AC022690.1-201ENST00000526681 550 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 AP003497.1-201ENST00000528472 562 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 OR5BN1P-201ENST00000532955 829 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.49□□□□□ -1.53
GRIN3BO60391 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.49□□□□□ -1.53
GRIN3BO60391 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.49□□□□□ -1.53
GRIN3BO60391 AL359219.2-201ENST00000555184 348 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.49□□□□□ -1.53
GRIN3BO60391 MIR4513-201ENST00000581077 86 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.49□□□□□ -1.53
GRIN3BO60391 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.49□□□□□ -1.53
GRIN3BO60391 AC060771.1-201ENST00000582031 164 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 AC110743.1-201ENST00000584870 478 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.49□□□□□ -1.53
GRIN3BO60391 AC105224.1-201ENST00000587055 421 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.49□□□□□ -1.53
GRIN3BO60391 AL606490.9-201ENST00000603331 271 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.49□□□□□ -1.53
GRIN3BO60391 AC010205.1-201ENST00000616668 449 ntBASIC5.49□□□□□ -1.53
GRIN3BO60391 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.49□□□□□ -1.53
GRIN3BO60391 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GRIN3BO60391 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GRIN3BO60391 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GRIN3BO60391 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GRIN3BO60391 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.49□□□□□ -1.53
GRIN3BO60391 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GRIN3BO60391 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GRIN3BO60391 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GRIN3BO60391 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms