Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RPL23AP47-201ENST00000408017 460 ntBASIC3.14□□□□□ -1.91
MSH4O15457 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.14□□□□□ -1.91
MSH4O15457 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.14□□□□□ -1.91
MSH4O15457 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
MSH4O15457 AL513043.1-201ENST00000439124 535 ntBASIC3.14□□□□□ -1.91
MSH4O15457 AC079776.3-201ENST00000450665 370 ntBASIC3.14□□□□□ -1.91
MSH4O15457 HMGB1P15-201ENST00000453854 435 ntBASIC3.14□□□□□ -1.91
MSH4O15457 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.14□□□□□ -1.91
MSH4O15457 HMGN2P16-201ENST00000456802 261 ntBASIC3.14□□□□□ -1.91
MSH4O15457 MTCO3P35-201ENST00000485582 781 ntBASIC3.14□□□□□ -1.91
MSH4O15457 AL024509.2-201ENST00000493462 493 ntBASIC3.14□□□□□ -1.91
MSH4O15457 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MSH4O15457 AC004062.1-201ENST00000509926 645 ntBASIC3.14□□□□□ -1.91
MSH4O15457 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.14□□□□□ -1.91
MSH4O15457 OR4P1P-201ENST00000530808 1136 ntBASIC3.14□□□□□ -1.91
MSH4O15457 LRRC6P1-201ENST00000532188 885 ntBASIC3.14□□□□□ -1.91
MSH4O15457 SYF2P1-201ENST00000550658 413 ntBASIC3.14□□□□□ -1.91
MSH4O15457 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
MSH4O15457 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.14□□□□□ -1.91
MSH4O15457 AC096947.1-201ENST00000603233 470 ntBASIC3.14□□□□□ -1.91
MSH4O15457 AC112220.2-201ENST00000605513 533 ntBASIC3.14□□□□□ -1.91
MSH4O15457 AC231759.1-201ENST00000616455 597 ntBASIC3.14□□□□□ -1.91
MSH4O15457 AL138960.2-201ENST00000625145 535 ntBASIC3.14□□□□□ -1.91
MSH4O15457 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.14□□□□□ -1.91
MSH4O15457 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.14□□□□□ -1.91
MSH4O15457 AC091152.2-201ENST00000591628 2569 ntBASIC3.14□□□□□ -1.91
MSH4O15457 AC005183.1-201ENST00000603687 1979 ntBASIC3.14□□□□□ -1.91
MSH4O15457 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MSH4O15457 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AC244517.1-201ENST00000606030 2086 ntBASIC3.13□□□□□ -1.91
MSH4O15457 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
MSH4O15457 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
MSH4O15457 RPL9P7-201ENST00000330965 580 ntBASIC3.13□□□□□ -1.91
MSH4O15457 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MSH4O15457 AL138827.1-201ENST00000402666 306 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AP000567.1-201ENST00000406413 156 ntBASIC3.13□□□□□ -1.91
MSH4O15457 RNU6-712P-201ENST00000410558 100 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.13□□□□□ -1.91
MSH4O15457 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.13□□□□□ -1.91
MSH4O15457 RPL7P52-201ENST00000449200 742 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.13□□□□□ -1.91
MSH4O15457 AC092757.1-201ENST00000467293 467 ntBASIC3.13□□□□□ -1.91
MSH4O15457 KLRA1P-201ENST00000503499 986 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.13□□□□□ -1.91
MSH4O15457 VN1R104P-201ENST00000505115 1009 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AC117522.3-201ENST00000507974 584 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AC093752.1-206ENST00000511823 336 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AC118942.1-201ENST00000529674 1035 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.13□□□□□ -1.91
MSH4O15457 AC126177.3-201ENST00000551839 688 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.13□□□□□ -1.91
MSH4O15457 AC087481.2-201ENST00000565492 330 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.13□□□□□ -1.91
MSH4O15457 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.13□□□□□ -1.91
MSH4O15457 AC138915.2-201ENST00000569776 97 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
MSH4O15457 AC138761.3-201ENST00000579993 334 ntBASIC3.13□□□□□ -1.91
MSH4O15457 VN1R90P-201ENST00000595717 726 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AL606834.3-201ENST00000602615 496 ntBASIC3.13□□□□□ -1.91
MSH4O15457 ATP1B3P1-201ENST00000605365 821 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AP001521.1-201ENST00000609150 300 ntBASIC3.13□□□□□ -1.91
MSH4O15457 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AC006111.3-201ENST00000622137 383 ntBASIC3.13□□□□□ -1.91
MSH4O15457 AC010872.1-201ENST00000624225 675 ntBASIC3.13□□□□□ -1.91
MSH4O15457 SNORA50A-202ENST00000629536 136 ntBASIC3.13□□□□□ -1.91
MSH4O15457 CYP3A51P-201ENST00000633513 256 ntBASIC3.13□□□□□ -1.91
MSH4O15457 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
MSH4O15457 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.13□□□□□ -1.91
MSH4O15457 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
MSH4O15457 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MSH4O15457 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.12□□□□□ -1.91
MSH4O15457 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.12□□□□□ -1.91
MSH4O15457 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.12□□□□□ -1.91
MSH4O15457 ARF4P3-201ENST00000397387 509 ntBASIC3.12□□□□□ -1.91
MSH4O15457 LUZP4P1-201ENST00000415420 344 ntBASIC3.12□□□□□ -1.91
MSH4O15457 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.12□□□□□ -1.91
MSH4O15457 AL590103.1-201ENST00000434488 307 ntBASIC3.12□□□□□ -1.91
MSH4O15457 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.12□□□□□ -1.91
MSH4O15457 RNF2P1-201ENST00000442955 1010 ntBASIC3.12□□□□□ -1.91
MSH4O15457 VN1R10P-201ENST00000447106 875 ntBASIC3.12□□□□□ -1.91
MSH4O15457 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
MSH4O15457 AC069528.1-202ENST00000482888 637 ntBASIC3.12□□□□□ -1.91
MSH4O15457 AC079203.1-201ENST00000487972 404 ntBASIC3.12□□□□□ -1.91
MSH4O15457 OR4G11P-201ENST00000492842 939 ntBASIC3.12□□□□□ -1.91
MSH4O15457 AC118282.1-201ENST00000506408 765 ntBASIC3.12□□□□□ -1.91
MSH4O15457 RNU6-27P-201ENST00000516146 107 ntBASIC3.12□□□□□ -1.91
MSH4O15457 AC090136.1-201ENST00000520009 240 ntBASIC3.12□□□□□ -1.91
MSH4O15457 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.12□□□□□ -1.91
MSH4O15457 COX6CP8-201ENST00000522620 226 ntBASIC3.12□□□□□ -1.91
MSH4O15457 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MSH4O15457 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.12□□□□□ -1.91
MSH4O15457 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.12□□□□□ -1.91
MSH4O15457 AC055876.1-202ENST00000567053 138 ntBASIC3.12□□□□□ -1.91
MSH4O15457 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.12□□□□□ -1.91
MSH4O15457 LARP7P2-201ENST00000575306 125 ntBASIC3.12□□□□□ -1.91
MSH4O15457 ZNF861P-201ENST00000588126 639 ntBASIC3.12□□□□□ -1.91
MSH4O15457 AL022067.1-201ENST00000602426 454 ntBASIC3.12□□□□□ -1.91
MSH4O15457 AC010975.3-201ENST00000618727 978 ntBASIC3.12□□□□□ -1.91
MSH4O15457 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.12□□□□□ -1.91
MSH4O15457 Z99129.2-201ENST00000619967 314 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms