Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 RANP3-201ENST00000530970 276 ntBASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 AC104581.2-201ENST00000572227 430 ntBASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 AC123768.4-201ENST00000616244 701 ntBASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 OR1S1-201ENST00000624470 978 ntBASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 AP000676.4-201ENST00000624659 623 ntBASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 ZNF90P1-201ENST00000480493 1951 ntBASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 SNORD56.5-201ENST00000364281 72 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 SNORA67.1-201ENST00000364749 141 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 MIR583-201ENST00000384846 75 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 RNU4-26P-201ENST00000410270 107 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 RPL23AP58-201ENST00000440453 469 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 AC079203.1-201ENST00000487972 404 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 RPL23AP63-201ENST00000498752 471 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 AC092436.1-201ENST00000506450 503 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 RNU6-711P-201ENST00000517255 106 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 RNU1-104P-201ENST00000517280 175 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 AC087808.1-201ENST00000520501 361 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 AC024224.1-201ENST00000538284 609 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 MIR3122-201ENST00000577243 73 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 DUXAP4-201ENST00000603046 613 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 RPAP2P1-201ENST00000603626 1168 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 AC084768.2-201ENST00000622736 221 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 AL359715.4-201ENST00000606629 1436 ntBASIC1.57□□□□□ -2.16
CPSF4LA6NMK7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 RNU6-600P-201ENST00000362524 99 ntBASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 AL030996.1-201ENST00000411430 235 ntBASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 VN1R51P-201ENST00000411675 945 ntBASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 HMGB1P45-201ENST00000435986 653 ntBASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 AC068587.2-201ENST00000478386 781 ntBASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 AC108734.3-201ENST00000481241 1165 ntBASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 AC023050.1-201ENST00000498198 304 ntBASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 OR5H4P-201ENST00000510851 923 ntBASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 RNA5SP182-201ENST00000516064 82 ntBASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 AP000867.2-201ENST00000532468 320 ntBASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 YWHAZP1-201ENST00000556286 722 ntBASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 AC105429.2-201ENST00000610567 517 ntBASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC1.56□□□□□ -2.16
CPSF4LA6NMK7 CENPCP1-201ENST00000533085 2578 ntBASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AL512646.1-201ENST00000269395 1077 ntBASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 CCNB2P1-201ENST00000399411 1150 ntBASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AL450338.1-201ENST00000407987 512 ntBASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 PGBD4P3-201ENST00000440731 581 ntBASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 Z96811.1-201ENST00000445880 108 ntBASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 RPL7L1P13-201ENST00000511702 739 ntBASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 SUB1P1-201ENST00000524415 382 ntBASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 MTND2P13-201ENST00000577438 1039 ntBASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AC012493.3-201ENST00000604494 112 ntBASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AL392112.1-201ENST00000605115 829 ntBASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AC009318.2-201ENST00000610917 651 ntBASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AC091046.2-201ENST00000620775 665 ntBASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AC233263.6-201ENST00000631132 1963 ntBASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CPSF4LA6NMK7 AC011460.1-201ENST00000636268 1834 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 RNU1-52P-201ENST00000384190 164 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 SNORA70B-201ENST00000384210 135 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 MIR153-1-201ENST00000384914 90 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 FO393413.1-201ENST00000402892 195 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 AL356057.2-201ENST00000403318 432 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 AL357078.2-201ENST00000416486 427 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 Z75741.2-201ENST00000417272 1167 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 AC234782.4-201ENST00000417646 1048 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 RPL7P52-201ENST00000449200 742 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 OR7L1P-201ENST00000456181 380 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 RPL23AP41-201ENST00000484754 458 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms