Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AC034229.4-201ENST00000607861 441 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AL390240.1-201ENST00000612950 384 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AL596245.1-201ENST00000618994 362 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AC110801.1-201ENST00000623590 212 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AC005539.1-201ENST00000443768 1479 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AC090740.1-201ENST00000623193 2262 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AC092326.2-201ENST00000624772 1561 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 MTND5P24-201ENST00000438892 1767 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AL356274.2-201ENST00000624379 3752 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 RNU6-173P-201ENST00000364215 104 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 SNORA70.4-201ENST00000365509 134 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 MIR184-201ENST00000384962 84 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 MIR34B-201ENST00000385076 84 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 MIR1284-201ENST00000408337 120 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 RPS15AP38-201ENST00000413110 372 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC126124.2-201ENST00000413542 321 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 RPL31P12-201ENST00000422587 358 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC007742.1-201ENST00000425789 329 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AL590103.1-201ENST00000434488 307 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 RPS25P9-201ENST00000435591 252 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 ELOCP26-201ENST00000436067 329 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 MTCO2P20-201ENST00000437339 673 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 MTCYBP31-201ENST00000438855 1122 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AL121871.1-201ENST00000443413 436 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC008264.1-201ENST00000447612 367 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 RPL23AP31-201ENST00000456160 467 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 SNORD11.1-201ENST00000459482 85 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 RPL23AP67-201ENST00000465341 474 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC112198.1-201ENST00000505369 1220 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 FCF1P8-201ENST00000510322 597 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 ARL2BPP6-201ENST00000512757 439 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC107934.2-201ENST00000518653 310 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC022861.1-201ENST00000522981 663 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 OR5AK1P-201ENST00000524837 922 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC009712.1-201ENST00000564938 316 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 MIR5186-201ENST00000577504 120 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC061975.8-201ENST00000587058 721 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 BDH2P1-201ENST00000602288 736 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 SRGNP1-201ENST00000603392 451 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AL355365.1-201ENST00000616480 294 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AL357080.1-201ENST00000617394 239 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AP000484.1-201ENST00000620067 1252 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 AP000776.1-201ENST00000530032 1663 ntBASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.2□□□□□ -1.9
ATG4BQ9Y4P1 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 RPL23AP57-201ENST00000332361 466 ntBASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 RPL23AP29-201ENST00000397284 453 ntBASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 RNU6-55P-201ENST00000411092 107 ntBASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 RNU6-954P-201ENST00000411355 107 ntBASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 AC007390.1-201ENST00000415722 356 ntBASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 AL356968.1-201ENST00000416622 474 ntBASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 AC006960.1-201ENST00000419980 153 ntBASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 RPS15AP6-201ENST00000420703 385 ntBASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 BEND7P1-201ENST00000422058 457 ntBASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 RPL23AP82-202ENST00000427528 469 ntBASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 AC097713.2-201ENST00000430199 356 ntBASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 TXNP1-201ENST00000441872 371 ntBASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 AL353691.1-201ENST00000451332 387 ntBASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.19□□□□□ -1.9
ATG4BQ9Y4P1 RPL7P18-201ENST00000478965 734 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms