Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MTND5P4-201ENST00000514978 288 ntBASIC2.97□□□□□ -1.93
SHANK2Q9UPX8 RNA5SP182-201ENST00000516064 82 ntBASIC2.97□□□□□ -1.93
SHANK2Q9UPX8 RNA5SP402-201ENST00000517148 110 ntBASIC2.97□□□□□ -1.93
SHANK2Q9UPX8 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
SHANK2Q9UPX8 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.97□□□□□ -1.93
SHANK2Q9UPX8 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.97□□□□□ -1.93
SHANK2Q9UPX8 Y_RNA.783-201ENST00000613546 102 ntBASIC2.97□□□□□ -1.93
SHANK2Q9UPX8 C2orf27A-204ENST00000623058 969 ntBASIC2.97□□□□□ -1.93
SHANK2Q9UPX8 AC244517.1-201ENST00000606030 2086 ntBASIC2.97□□□□□ -1.93
SHANK2Q9UPX8 AC008173.1-201ENST00000418901 264 ntBASIC2.96□□□□□ -1.93
SHANK2Q9UPX8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.96□□□□□ -1.93
SHANK2Q9UPX8 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.96□□□□□ -1.93
SHANK2Q9UPX8 RPL5P13-201ENST00000462840 709 ntBASIC2.96□□□□□ -1.93
SHANK2Q9UPX8 AP000852.1-201ENST00000472460 573 ntBASIC2.96□□□□□ -1.93
SHANK2Q9UPX8 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.96□□□□□ -1.93
SHANK2Q9UPX8 TTC39CP1-201ENST00000512513 755 ntBASIC2.96□□□□□ -1.93
SHANK2Q9UPX8 snoZ278.1-201ENST00000517059 112 ntBASIC2.96□□□□□ -1.93
SHANK2Q9UPX8 MIR3683-201ENST00000580847 82 ntBASIC2.96□□□□□ -1.93
SHANK2Q9UPX8 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.96□□□□□ -1.93
SHANK2Q9UPX8 MIR6779-201ENST00000617283 64 ntBASIC2.96□□□□□ -1.93
SHANK2Q9UPX8 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.96□□□□□ -1.93
SHANK2Q9UPX8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
SHANK2Q9UPX8 AL512283.1-201ENST00000606756 1384 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 RNA5SP190-201ENST00000365222 118 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 RNU6-1320P-201ENST00000390838 107 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 RNU6-1269P-201ENST00000391139 107 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 SNORA40.18-201ENST00000391200 128 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 AC104332.2-201ENST00000429959 156 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 PTGES3P5-201ENST00000455109 434 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 RNU6-599P-201ENST00000459383 107 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 RNU6-1193P-201ENST00000459461 107 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 GZMAP1-201ENST00000503054 631 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 SUB1P3-201ENST00000564581 315 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 AL356280.1-201ENST00000603614 379 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 RNU6-368P-201ENST00000620928 107 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 RNU6-538P-201ENST00000622329 107 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 AL353746.1-201ENST00000566293 6881 ntBASIC2.96□□□□□ -1.94
SHANK2Q9UPX8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.95□□□□□ -1.94
SHANK2Q9UPX8 AL358453.1-201ENST00000422522 250 ntBASIC2.95□□□□□ -1.94
SHANK2Q9UPX8 AC003989.2-201ENST00000440224 169 ntBASIC2.95□□□□□ -1.94
SHANK2Q9UPX8 AC092473.1-201ENST00000441098 221 ntBASIC2.95□□□□□ -1.94
SHANK2Q9UPX8 FABP5P13-201ENST00000452144 328 ntBASIC2.95□□□□□ -1.94
SHANK2Q9UPX8 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.95□□□□□ -1.94
SHANK2Q9UPX8 AC087190.1-201ENST00000484462 480 ntBASIC2.95□□□□□ -1.94
SHANK2Q9UPX8 AC140059.1-201ENST00000489238 361 ntBASIC2.95□□□□□ -1.94
SHANK2Q9UPX8 AC092436.3-201ENST00000511788 257 ntBASIC2.95□□□□□ -1.94
SHANK2Q9UPX8 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.95□□□□□ -1.94
SHANK2Q9UPX8 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.95□□□□□ -1.94
SHANK2Q9UPX8 AC106730.3-201ENST00000624568 641 ntBASIC2.95□□□□□ -1.94
SHANK2Q9UPX8 AC132825.8-201ENST00000640783 297 ntBASIC2.95□□□□□ -1.94
SHANK2Q9UPX8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHANK2Q9UPX8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHANK2Q9UPX8 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHANK2Q9UPX8 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.94□□□□□ -1.94
SHANK2Q9UPX8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.94□□□□□ -1.94
SHANK2Q9UPX8 RSL24D1P2-201ENST00000445584 366 ntBASIC2.94□□□□□ -1.94
SHANK2Q9UPX8 AC104435.1-201ENST00000483483 166 ntBASIC2.94□□□□□ -1.94
SHANK2Q9UPX8 AP000790.1-201ENST00000528891 737 ntBASIC2.94□□□□□ -1.94
SHANK2Q9UPX8 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.94□□□□□ -1.94
SHANK2Q9UPX8 RPAP2P1-201ENST00000603626 1168 ntBASIC2.94□□□□□ -1.94
SHANK2Q9UPX8 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.94□□□□□ -1.94
SHANK2Q9UPX8 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.93□□□□□ -1.94
SHANK2Q9UPX8 AC019129.1-201ENST00000403786 261 ntBASIC2.93□□□□□ -1.94
SHANK2Q9UPX8 AP000275.1-201ENST00000411943 390 ntBASIC2.93□□□□□ -1.94
SHANK2Q9UPX8 AC009238.1-201ENST00000442165 424 ntBASIC2.93□□□□□ -1.94
SHANK2Q9UPX8 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.93□□□□□ -1.94
SHANK2Q9UPX8 AC009237.6-201ENST00000446969 424 ntBASIC2.93□□□□□ -1.94
SHANK2Q9UPX8 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SHANK2Q9UPX8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.93□□□□□ -1.94
SHANK2Q9UPX8 AP005136.1-201ENST00000579765 429 ntBASIC2.93□□□□□ -1.94
SHANK2Q9UPX8 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.93□□□□□ -1.94
SHANK2Q9UPX8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SHANK2Q9UPX8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SHANK2Q9UPX8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 RNA5SP181-201ENST00000410246 98 ntBASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 AC005517.2-201ENST00000424673 553 ntBASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 DNAJC19P4-201ENST00000440115 345 ntBASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 HSPE1P22-201ENST00000456856 327 ntBASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 RPS26P21-201ENST00000475397 348 ntBASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 AC006483.1-201ENST00000487308 313 ntBASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 AC007182.2-201ENST00000489251 402 ntBASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 RPS29P11-201ENST00000496507 171 ntBASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 RPL23AP63-201ENST00000498752 471 ntBASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 HMGB3P15-201ENST00000507326 574 ntBASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 AC098799.2-201ENST00000509466 868 ntBASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 AC010546.1-201ENST00000569391 485 ntBASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 AC091953.2-201ENST00000623979 160 ntBASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 AC009452.1-201ENST00000640823 606 ntBASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHANK2Q9UPX8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms